RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TBR1Q16650 682 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 FAM214AQ32MH5 1076 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 VWA3BQ502W6 1294 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC9C2Q5TAH2 1124 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 MAP3K21Q5TCX8 1036 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 RINT1Q6NUQ1 792 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 OLFM4Q6UX06 510 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NEK10Q6ZWH5 1172 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 RAB11FIP2Q7L804 512 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 PPP1R32Q7Z5V6 425 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 GAS2L3Q86XJ1 694 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NRSN1Q8IZ57 195 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 PDPRQ8NCN5 879 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 RFFLQ8WZ73 363 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 ST8SIA4Q92187 359 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 DCPSQ96C86 337 aaKnown RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 SDCCAG3Q96C92 435 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NEIL1Q96FI4 390 aaPredicted RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 AJUBAQ96IF1 538 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC46A1Q96NT5 459 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 MOGAT1Q96PD6 335 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 TWNKQ96RR1 684 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 VKORC1Q9BQB6 163 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NUDT16L1Q9BRJ7 211 aaKnown RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 MESP1Q9BRJ9 268 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 AGXT2Q9BYV1 514 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 NELFAQ9H3P2 528 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 CHODLQ9H9P2 273 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 TMOD4Q9NZQ9 345 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 ORC3Q9UBD5 711 aaPredicted RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 DAPP1Q9UN19 280 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 SMG5Q9UPR3 1016 aaKnown RBP5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 HPSEQ9Y251 543 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 PMF1-BGLAPU3KQ54 211 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 MYOM3Q5VTT5 1437 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 RPGRIP1LQ68CZ1 1315 aa5.46□□□□□ -1.54
MTHFD1-216ENST00000557539 KIF24Q5T7B8 1368 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 ANKRD30AQ9BXX3 1397 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 EP300Q09472 2414 aaPredicted RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 E7EVH7 732 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 DCXO43602 365 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 CCNT2O60583 730 aaKnown RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 PPP6R2O75170 966 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 TIPRLO75663 272 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 RTN3O95197 1032 aaPredicted RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 VIPP01282 170 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 ADRB1P08588 477 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 CSF2RBP32927 897 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 CLNS1AP54105 237 aaKnown RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 FKBP1BP68106 108 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 NFIXQ14938 502 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 IQCB1Q15051 598 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 RPS6KA2Q15349 733 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 CCDC96Q2M329 555 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 ZNF750Q32MQ0 723 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 ZMAT1Q5H9K5 638 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 C9orf50Q5SZB4 431 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 PDXDC1Q6P996 788 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 XYLT1Q86Y38 959 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 ZNF280BQ86YH2 543 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 SP8Q8IXZ3 490 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 FITM2Q8N6M3 262 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 TDRD7Q8NHU6 1098 aaKnown RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 FNIP1Q8TF40 1166 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 PIGBQ92521 554 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 KCNN1Q92952 543 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 CDCA5Q96FF9 252 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 C7orf26Q96N11 449 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 SGPP1Q9BX95 441 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 TWSG1Q9GZX9 223 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 SLC25A32Q9H2D1 315 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 PRKRIP1Q9H875 184 aaPredicted RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 NOD2Q9HC29 1040 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 IL23AQ9NPF7 189 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 SMYD2Q9NRG4 433 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 RRP7AQ9Y3A4 280 aaKnown RBP5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 KIF1BO60333 1816 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 SSC5DA1L4H1 1573 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 LRRC37A2A6NM11 1700 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 PLXNA3P51805 1871 aa5.45□□□□□ -1.54
MTHFD1-216ENST00000557539 AFDNP55196 1824 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 UBE2QL1A1L167 161 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 PGPEP1LA6NFU8 196 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 B5MCH6 92 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 F5H0A9 414 aaPredicted RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 J3KTA2 159 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 DCLK1O15075 740 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 RGS10O43665 173 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 STC2O76061 302 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 PLA2G1BP04054 148 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 CYP1A1P04798 512 aaPredicted RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 CHRM3P20309 590 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 RPS6KB1P23443 525 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 RAD52P43351 418 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 ATXN1P54253 815 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 INHBEP58166 350 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 UBXN2AP68543 259 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 HGFACQ04756 655 aa5.44□□□□□ -1.54
MTHFD1-216ENST00000557539 GPS1Q13098 491 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms