RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MTG2Q9H4K7 406 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 CLIC5Q9NZA1 410 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 SFMBT1Q9UHJ3 866 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 RCOR1Q9UKL0 485 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 KNTC1P50748 2209 aa14.75□□□□□ -0.05
SLIRP-210ENST00000557431 LAMA5O15230 3695 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 BCAT2O15382 392 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 MSI1O43347 362 aaKnown RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 ATXN1LP0C7T5 689 aaKnown RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 ACADMP11310 421 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 KRT13P13646 458 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 HOXD9P28356 352 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 CHKAP35790 457 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 MATKP42679 507 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 TKTL1P51854 596 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 IL9RQ01113 521 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 SLC14A1Q13336 389 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 GOLGA7BQ2TAP0 167 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 HLA-BQ31612 363 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 CCNI2Q6ZMN8 369 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 BHLHA9Q7RTU4 235 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 FMNL3Q8IVF7 1028 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 ZC3H3Q8IXZ2 948 aaKnown RBP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 WFDC5Q8TCV5 224 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 EDEM1Q92611 657 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 TMEM8AQ9HCN3 771 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 CISHQ9NSE2 258 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 TOR4AQ9NXH8 423 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.74□□□□□ -0.05
SLIRP-210ENST00000557431 ZNF510Q9Y2H8 683 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 GPSM3Q9Y4H4 160 aa14.74□□□□□ -0.05
SLIRP-210ENST00000557431 ARID1BQ8NFD5 2236 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 ASXL3Q9C0F0 2248 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 DSPP15924 2871 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 FAM149AA5PLN7 773 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 PIK3R2O00459 728 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 CYBBP04839 570 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 HLA-FP30511 346 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 ARID5AQ03989 594 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 PDE4CQ08493 712 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 HNRNPDQ14103 355 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 FNDC3BQ53EP0 1204 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 RAB41Q5JT25 222 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 INTS8Q75QN2 995 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 CHST9Q7L1S5 443 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 TADA2BQ86TJ2 420 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 CPXM2Q8N436 756 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 C1orf216Q8TAB5 229 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 UBA3Q8TBC4 463 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 TMEM174Q8WUU8 243 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 HNRNPLLQ8WVV9 542 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 TMEM176AQ96HP8 235 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 DCLK3Q9C098 648 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 LHX5Q9H2C1 402 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 CCDC86Q9H6F5 360 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
SLIRP-210ENST00000557431 HPSEQ9Y251 543 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 SNX11Q9Y5W9 270 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 FREM2Q5SZK8 3169 aa14.73□□□□□ -0.05
SLIRP-210ENST00000557431 MAPK13O15264 365 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 CER1O95813 267 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 CALCAP01258 141 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 PSMC2P35998 433 aaKnown RBP14.72□□□□□ -0.05
SLIRP-210ENST00000557431 MXI1P50539 228 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 NDUFA8P51970 172 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 CLDN6P56747 220 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 ADIGQ0VDE8 80 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 DPYDQ12882 1025 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 ADAM9Q13443 819 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 ACAP1Q15027 740 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 KIF19Q2TAC6 998 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 KCNT1Q5JUK3 1230 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 KRT39Q6A163 491 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 ZNF276Q8N554 614 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 CCDC150Q8NCX0 1101 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 CADM4Q8NFZ8 388 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 OR2T3Q8NH03 318 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 BAHD1Q8TBE0 780 aaPredicted RBP14.72□□□□□ -0.05
SLIRP-210ENST00000557431 RHBDD1Q8TEB9 315 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 CRELD1Q96HD1 420 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 ZDHHC5Q9C0B5 715 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 GOLPH3LQ9H4A5 285 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 ABCB8Q9NUT2 735 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 TSPAN16Q9UKR8 245 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 STRIP2Q9ULQ0 834 aa14.72□□□□□ -0.05
SLIRP-210ENST00000557431 GOLGA6L7A0A1B0GV03 622 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 RHOBTB3O94955 611 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 ZBED1O96006 694 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 OXTRP30559 389 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 SYKP43405 635 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 NUMBP49757 651 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 LRMPQ12912 555 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 TRIP4Q15650 581 aaPredicted RBP14.71□□□□□ -0.05
SLIRP-210ENST00000557431 ARHGAP17Q68EM7 881 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 RFWD3Q6PCD5 774 aa14.71□□□□□ -0.05
SLIRP-210ENST00000557431 PDZD3Q86UT5 571 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms