RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 PRKCAP17252 672 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 GJA1P17302 382 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CASQ1P31415 396 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 PEX19P40855 299 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 BRCC3P46736 316 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 SEPHS1P49903 392 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CCT2P78371 535 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 TWF1Q12792 350 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 PLD1Q13393 1074 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 KARSQ15046 597 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 NR0B2Q15466 257 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 NTRK3Q16288 839 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 SV2CQ496J9 727 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CTXN3Q4LDR2 81 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 TMEM196Q5HYL7 178 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 HLA-DQA1Q5Y7H0 255 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ZSCAN30Q86W11 494 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ARID3BQ8IVW6 561 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ZBTB8OSQ8IWT0 167 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 FAM184AQ8NB25 1140 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 TTC8Q8TAM2 541 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 EVPLQ92817 2033 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 RSPRY1Q96DX4 576 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 DYDC2Q96IM9 177 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 LRRC3BQ96PB8 259 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 PPP1R10Q96QC0 940 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 HSD17B14Q9BPX1 270 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ADPGKQ9BRR6 497 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 SLC12A9Q9BXP2 914 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 C2orf40Q9H1Z8 148 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CXCL16Q9H2A7 254 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 DEF6Q9H4E7 631 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CXorf56Q9H5V9 222 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CHCHD3Q9NX63 227 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ERVK13-1Q9NX77 482 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 GTSE1Q9NYZ3 720 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 RSPH14Q9UHP6 348 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 FBXL5Q9UKA1 691 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 CNOT1A5YKK6 2376 aaKnown RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 F5P12259 2224 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 C2orf16Q68DN1 1984 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 SMIM28A0A1B0GU29 152 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 LNP1A1A4G5 178 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 ANKRD34BA5PLL1 514 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 TCAF2A6NFQ2 919 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 LRRIQ4A6NIV6 560 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 EIF4E1BA6NMX2 242 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 CDX4O14627 284 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 TRDMT1O14717 391 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 DCLK1O15075 740 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 MEFVO15553 781 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 CBFA2T2O43439 604 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 SLC37A4O43826 429 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 PEX14O75381 377 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 STK10O94804 968 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 FGF19O95750 216 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 FAM200BP0CF97 657 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 IFNGR1P15260 489 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 GCFC2P16383 781 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 DRD1P21728 446 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 MARCKSP29966 332 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 RPL9P32969 192 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 ALDH1A3P47895 512 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 EPHB3P54753 998 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 PSMC1P62191 440 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 CYP4F8P98187 520 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 CYP4A11Q02928 519 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 LAPTM5Q13571 262 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 NCAPHQ15003 741 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 MAPK6Q16659 721 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 INF2Q27J81 1249 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 ADCK5Q3MIX3 580 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 DCAF4L1Q3SXM0 396 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 HSF5Q4G112 596 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 FBXO43Q4G163 708 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 USP39Q53GS9 565 aaKnown RBP5.26□□□□□ -1.57
ATXN3-247ENST00000557311 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 XKR4Q5GH76 650 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 C19orf48Q6RUI8 117 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 Q6ZUG5 572 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 PROSER1Q86XN7 944 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 FBXL16Q8N461 479 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 DEFB124Q8NES8 71 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 HAS1Q92839 578 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 EXOC4Q96A65 974 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 ZFYVE19Q96K21 471 aa5.26□□□□□ -1.57
ATXN3-247ENST00000557311 CCDC43Q96MW1 224 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms