RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FREM2Q5SZK8 3169 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 NBEAQ8NFP9 2946 aa9.16□□□□□ -0.94
VRK1-206ENST00000557222 A0A1W2PQD8 194 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 CLDN5O00501 218 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 NPC1O15118 1278 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 STX6O43752 255 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 CUTAO60888 179 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 PHACTR2O75167 634 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 YEATS4O95619 227 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 RPN1P04843 607 aaKnown RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 SYPP08247 313 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 CYP2J2P51589 502 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 ZNF132P52740 706 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 SLC5A3P53794 718 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 ATXN3P54252 364 aaPredicted RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 GOLGA8FQ08AF8 430 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 GOLGA8DPQ0D2H9 430 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 E2F5Q15329 346 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 KNOP1Q1ED39 458 aaKnown RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 UAP1L1Q3KQV9 507 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 ZNF667Q5HYK9 610 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 SDE2Q6IQ49 451 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 KLHDC10Q6PID8 442 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 PAQR9Q6ZVX9 377 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 FAM35AQ86V20 835 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 SFTPA1Q8IWL2 248 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 HDDC3Q8N4P3 179 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 ZNF276Q8N554 614 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 DEFB124Q8NES8 71 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 SCAMP5Q8TAC9 235 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 PARD3BQ8TEW8 1205 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 TAF4BQ92750 862 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 HPS3Q969F9 1004 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 XPO6Q96QU8 1125 aaKnown RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 KCNK16Q96T55 309 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 GABRG3Q99928 467 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 SCNM1Q9BWG6 230 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 GZF1Q9H116 711 aaPredicted RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 FAM124BQ9H5Z6 455 aaPredicted RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 CAPN10Q9HC96 672 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.943e-7■■□□□ 14.4
VRK1-206ENST00000557222 TLR8Q9NR97 1041 aaKnown RBP9.15□□□□□ -0.94
VRK1-206ENST00000557222 NFE2L3Q9Y4A8 694 aa9.15□□□□□ -0.94
VRK1-206ENST00000557222 ITPR1Q14643 2758 aa9.15□□□□□ -0.95
VRK1-206ENST00000557222 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.95
VRK1-206ENST00000557222 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.95
VRK1-206ENST00000557222 LAMA5O15230 3695 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 A0A1W2PQF6 199 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ANTXRLA6NF34 631 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 IKBKBO14920 756 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 CLIC2O15247 247 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 CACNG3O60359 315 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 GREM1O60565 184 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 TLR5O60602 858 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 EXOC3O60645 756 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 OPHN1O60890 802 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 C4BPAP04003 597 aaKnown RBP9.14□□□□□ -0.95
VRK1-206ENST00000557222 HOXB2P14652 356 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 GABRG2P18507 467 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ITPKAP23677 461 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 RPL6Q02878 288 aaKnown RBP9.14□□□□□ -0.95
VRK1-206ENST00000557222 KDSRQ06136 332 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ZNF33AQ06730 810 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 SGSM1Q2NKQ1 1148 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ANO4Q32M45 955 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ZNF699Q32M78 642 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 C10orf76Q5T2E6 689 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 GRAMD4Q6IC98 578 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 CHSY3Q70JA7 882 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 TMEM25Q86YD3 366 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 BBS7Q8IWZ6 715 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 DHX58Q96C10 678 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ZNF419Q96HQ0 510 aaPredicted RBP9.14□□□□□ -0.95
VRK1-206ENST00000557222 MED10Q9BTT4 135 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ZDHHC5Q9C0B5 715 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 NACA2Q9H009 215 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 SMYD3Q9H7B4 428 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 CCSER2Q9H7U1 834 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 CD248Q9HCU0 757 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 PNPLA8Q9NP80 782 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 DMAC2Q9NW81 257 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 SUSD2Q9UGT4 822 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 LSM7Q9UK45 103 aaKnown RBP9.14□□□□□ -0.95
VRK1-206ENST00000557222 SCML2Q9UQR0 700 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ZNF510Q9Y2H8 683 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 ACACAQ13085 2346 aa9.14□□□□□ -0.95
VRK1-206ENST00000557222 KNL1Q8NG31 2342 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 IGHV1OR15-9A0A0B4J2B8 117 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 CFIP05156 583 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 ATP5C1P36542 298 aaKnown RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 MAPK8P45983 427 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 DGKGP49619 791 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 CDH8P55286 799 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 SIM1P81133 766 aaPredicted RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 ENPEPQ07075 957 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 IFRD2Q12894 506 aaPredicted RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 BIRC3Q13489 604 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 ZACNQ401N2 412 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms