RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SERPINB11Q96P15 392 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 ELOVL2Q9NXB9 296 aa13.14□□□□□ -0.31
SNX6-207ENST00000556303 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
SNX6-207ENST00000556303 TM4SF5O14894 197 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 C7P10643 843 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 BCKDHBP21953 392 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 HOXD9P28356 352 aaPredicted RBP13.13□□□□□ -0.31
SNX6-207ENST00000556303 GNA15P30679 374 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
SNX6-207ENST00000556303 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
SNX6-207ENST00000556303 SNX16P57768 344 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 MAN2A1Q16706 1144 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 GEN1Q17RS7 908 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 STPG1Q5TH74 334 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 PEAR1Q5VY43 1037 aaPredicted RBP13.13□□□□□ -0.31
SNX6-207ENST00000556303 KIAA0907Q7Z7F0 614 aaPredicted RBP13.13□□□□□ -0.31
SNX6-207ENST00000556303 CREBRFQ8IUR6 639 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNX6-207ENST00000556303 CEP76Q8TAP6 659 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 RLN3Q8WXF3 142 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 SHC3Q92529 594 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 ACOX2Q99424 681 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 CRACR2AQ9BSW2 395 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 ZDHHC4Q9NPG8 344 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
SNX6-207ENST00000556303 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 TLR6Q9Y2C9 796 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 STON1Q9Y6Q2 735 aa13.13□□□□□ -0.31
SNX6-207ENST00000556303 MED19A0JLT2 244 aaPredicted RBP13.12□□□□□ -0.31
SNX6-207ENST00000556303 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 ACSL4O60488 711 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 SYNCRIPO60506 623 aaKnown RBP13.12□□□□□ -0.31
SNX6-207ENST00000556303 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
SNX6-207ENST00000556303 GLI1P08151 1106 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 NCAM1P13591 858 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 NDUFV2P19404 249 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 SLC9A1P19634 815 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 PON1P27169 355 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 DHPSP49366 369 aaPredicted RBP13.12□□□□□ -0.31
SNX6-207ENST00000556303 TBX4P57082 545 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 LMAN2Q12907 356 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 MTA1Q13330 715 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 CCDC6Q16204 474 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 PIK3R6Q5UE93 754 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 LYSMD4Q5XG99 296 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 SCUBE3Q8IX30 993 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 MIS12Q9H081 205 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 LHX5Q9H2C1 402 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 FBRSQ9HAH7 460 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 POPDC2Q9HBU9 364 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 TMEM51Q9NW97 253 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 ASNSD1Q9NWL6 643 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 CACNA1EQ15878 2313 aa13.12□□□□□ -0.31
SNX6-207ENST00000556303 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 IGHV1OR15-9A0A0B4J2B8 117 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
SNX6-207ENST00000556303 THAP12O43422 761 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 FYNP06241 537 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 IL12RB1P42701 662 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 WASP42768 502 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 BPIFB4P59827 614 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 RPL6Q02878 288 aaKnown RBP13.11□□□□□ -0.31
SNX6-207ENST00000556303 ARID5AQ03989 594 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 PTK2Q05397 1052 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 DAB2IPQ5VWQ8 1189 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 SLC23A3Q6PIS1 610 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 AHI1Q8N157 1196 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 PIGKQ92643 395 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 SLC39A13Q96H72 371 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
SNX6-207ENST00000556303 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 EDEM2Q9BV94 578 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 LSM14BQ9BX40 385 aaKnown RBP13.11□□□□□ -0.31
SNX6-207ENST00000556303 NUSAP1Q9BXS6 441 aaKnown RBP13.11□□□□□ -0.31
SNX6-207ENST00000556303 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 PILRBQ9UKJ0 227 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 CHD8Q9HCK8 2581 aa13.11□□□□□ -0.31
SNX6-207ENST00000556303 LNP1A1A4G5 178 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 BECN2A8MW95 431 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 CAPN9O14815 690 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 PAPSS1O43252 624 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms