RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 TMEM8BA6NDV4 472 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 CLDN5O00501 218 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 AP1G2O75843 785 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 CALCAP01258 141 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 SERPING1P05155 500 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 HNRNPH3P31942 346 aaKnown RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 P2RY2P41231 377 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 SLC6A11P48066 632 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 BCAT1P54687 386 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 ADKP55263 362 aaKnown RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 CDR2Q01850 454 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 KLHL30Q0D2K2 578 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 GAB4Q2WGN9 574 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 ANO4Q32M45 955 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 TRIM61Q5EBN2 209 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 LY6G5CQ5SRR4 150 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 IRF2BP2Q7Z5L9 587 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 HDDC3Q8N4P3 179 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 ANKRD52Q8NB46 1076 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 OLIG1Q8TAK6 271 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 DUSP16Q9BY84 665 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 CHORDC1Q9UHD1 332 aaPredicted RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.28
APEX1-213ENST00000556296 PCDHGC3Q9UN70 934 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 CEP83Q9Y592 693 aa13.33□□□□□ -0.28
APEX1-213ENST00000556296 TCRBV21S2A2A0A5A6 115 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 M0QYV0 167 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 SGK1O00141 431 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 HOXC11O43248 304 aaPredicted RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 COCHO43405 550 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 ZNF217O75362 1048 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 SETSIPP0DME0 302 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 BCKDHBP21953 392 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 SLC5A3P53794 718 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 GSDMDP57764 484 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 IRX4P78413 519 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 KDSRQ06136 332 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 BST2Q10589 180 aaKnown RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 FOXC1Q12948 553 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 E2F5Q15329 346 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 TDRD12Q587J7 1177 aaKnown RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 SNX30Q5VWJ9 437 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 UNQ6494/PRO21346Q6UXR6 183 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 TRIM72Q6ZMU5 477 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 TADA2BQ86TJ2 420 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 VPS36Q86VN1 386 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 ZNF513Q8N8E2 541 aaPredicted RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 TC2NQ8N9U0 490 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 AGPAT1Q99943 283 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 HAUS4Q9H6D7 363 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 CSNK1G1Q9HCP0 422 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 TLR8Q9NR97 1041 aaKnown RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 IL37Q9NZH6 218 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
APEX1-213ENST00000556296 CNOT1A5YKK6 2376 aaKnown RBP13.32□□□□□ -0.28
APEX1-213ENST00000556296 ABCA7Q8IZY2 2146 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 FAM92AA1XBS5 289 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 LSM8O95777 96 aaKnown RBP13.31□□□□□ -0.28
APEX1-213ENST00000556296 KIR2DL1P43626 348 aaPredicted RBP13.31□□□□□ -0.28
APEX1-213ENST00000556296 MAP3K7CLP57077 242 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 GFPT1Q06210 699 aaPredicted RBP13.31□□□□□ -0.28
APEX1-213ENST00000556296 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
APEX1-213ENST00000556296 DUOXA1Q1HG43 343 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 GRAMD4Q6IC98 578 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 SLC23A3Q6PIS1 610 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 CLEC20AQ6ZU45 233 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 TMEM35BQ8NCS4 154 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 UBA3Q8TBC4 463 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 SLC20A1Q8WUM9 679 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 RLN3Q8WXF3 142 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 PANX2Q96RD6 677 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 KCNK16Q96T55 309 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 LHX5Q9H2C1 402 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 PNPLA8Q9NP80 782 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 SPHK2Q9NRA0 654 aa13.31□□□□□ -0.28
APEX1-213ENST00000556296 NUP205Q92621 2012 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 CDX4O14627 284 aaPredicted RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 XPO1O14980 1071 aaKnown RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 TULP3O75386 442 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 CFIP05156 583 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 SYPP08247 313 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 MMEP08473 750 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 ZDHHC11BP0C7U3 371 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms