RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 MAPRE1Q15691 268 aaKnown RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 DPYSL2Q16555 572 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 C15orf59Q2T9L4 293 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SMTNL2Q2TAL5 461 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 RAB41Q5JT25 222 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ERMARDQ5T6L9 678 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 KIAA0319Q5VV43 1072 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 KDM7AQ6ZMT4 941 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CLEC20AQ6ZU45 233 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 BEND5Q7L4P6 421 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 RTN4RL1Q86UN2 441 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CD163Q86VB7 1156 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 METTL23Q86XA0 190 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SIX5Q8N196 739 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ARFGAP2Q8N6H7 521 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 IRGQQ8WZA9 623 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CFAP57Q96MR6 1250 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SLC2A13Q96QE2 648 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SLC9A7Q96T83 725 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 PKMYT1Q99640 499 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SYT15Q9BQS2 421 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 ELAC1Q9H777 363 aaKnown RBP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 LRRC4Q9HBW1 653 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 PCDH18Q9HCL0 1135 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CSNK1G1Q9HCP0 422 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 CNGB3Q9NQW8 809 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 PRDM6Q9NQX0 595 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.63□□□□□ -1.03
ATXN3-235ENST00000556082 TMEM51Q9NW97 253 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 RRN3Q9NYV6 651 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 SHOC2Q9UQ13 582 aa8.63□□□□□ -1.03
ATXN3-235ENST00000556082 THSD7BQ9C0I4 1608 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 A0A1W2PQ45 241 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 A0A1W2PQY0 241 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 MYBPHLA2RUH7 354 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 MCF2LO15068 1137 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 EIF3HO15372 352 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 GRAP2O75791 330 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 ZNF189O75820 626 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 B3GAT3O94766 335 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 ABHD2P08910 425 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 CD48P09326 243 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 LCP1P13796 627 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 IGFBP6P24592 240 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 L1CAMP32004 1257 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 GRK4P32298 578 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 RDXP35241 583 aaKnown RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 GYS2P54840 703 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 AIF1P55008 147 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 EIF3EP60228 445 aaKnown RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 ATP11AP98196 1134 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 DSC1Q08554 894 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 IFFO1Q0D2I5 559 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 XRCC4Q13426 336 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 KRT81Q14533 505 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 NOMO1Q15155 1222 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 P3H1Q32P28 736 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 ANKRD20A8PQ5CZ79 823 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 TNFAIP8L3Q5GJ75 292 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 MDH1BQ5I0G3 518 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 IZUMO3Q5VZ72 239 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PM20D1Q6GTS8 502 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 GLB1LQ6UWU2 654 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 C4orf22Q6V702 233 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 RFX6Q8HWS3 928 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 THEM5Q8N1Q8 247 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PQLC3Q8N755 202 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PLD5Q8N7P1 536 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 C3orf58Q8NDZ4 430 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PCDH19Q8TAB3 1148 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 ADAMTS19Q8TE59 1207 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 RSPH1Q8WYR4 309 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 HSPH1Q92598 858 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 P3H4Q92791 437 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 ACSF2Q96CM8 615 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 TLCD1Q96CP7 247 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 RTP4Q96DX8 246 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PGAP3Q96FM1 320 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PCED1BQ96HM7 432 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 NPY6RQ99463 290 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 SMOQ99835 787 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 RTP3Q9BQQ7 232 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 CALN1Q9BXU9 219 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 STMN4Q9H169 189 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 TRPV6Q9H1D0 765 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 PNPLA8Q9NP80 782 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 NGRNQ9NPE2 291 aaKnown RBP8.62□□□□□ -1.03
ATXN3-235ENST00000556082 STARD7Q9NQZ5 370 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 STAP1Q9ULZ2 295 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 TRIP11Q15643 1979 aa8.62□□□□□ -1.03
ATXN3-235ENST00000556082 BCLAF3A2AJT9 711 aaKnown RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 CASTOR2A6NHX0 329 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 HHLA1C9JL84 531 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SGK1O00141 431 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 DNM1LO00429 736 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 CLDN5O00501 218 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms