RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 CDC6Q99741 560 aa17.74■□□□□ 0.43
XRCC3-215ENST00000555964 CISHQ9NSE2 258 aa17.74■□□□□ 0.43
XRCC3-215ENST00000555964 NUMA1Q14980 2115 aa17.74■□□□□ 0.43
XRCC3-215ENST00000555964 YWHAEP62258 255 aaKnown RBP17.73■□□□□ 0.43
XRCC3-215ENST00000555964 KRT85P78386 507 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 RING1Q06587 406 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 SUZ12Q15022 739 aaKnown RBP17.73■□□□□ 0.43
XRCC3-215ENST00000555964 TEAD4Q15561 434 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 MPPE1Q53F39 396 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 RAB41Q5JT25 222 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 ZNF557Q8N988 423 aaPredicted RBP17.73■□□□□ 0.43
XRCC3-215ENST00000555964 ANKRD52Q8NB46 1076 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 ENGASEQ8NFI3 743 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 OR2T3Q8NH03 318 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 GAREM1Q9H706 876 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 PCOLCE2Q9UKZ9 415 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 HPSEQ9Y251 543 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 HBS1LQ9Y450 684 aaKnown RBP17.73■□□□□ 0.43
XRCC3-215ENST00000555964 PCDHGB2Q9Y5G2 931 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 AKAP13Q12802 2813 aa17.73■□□□□ 0.43
XRCC3-215ENST00000555964 ADAMTS20P59510 1910 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 PLXNB3Q9ULL4 1909 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 FLRT2O43155 660 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 LATS1O95835 1130 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 ZBED1O96006 694 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 EPB41P11171 864 aaKnown RBP17.72■□□□□ 0.43
XRCC3-215ENST00000555964 PRKCHP24723 683 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 AFF3P51826 1226 aaKnown RBP17.72■□□□□ 0.43
XRCC3-215ENST00000555964 BCAT1P54687 386 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 SCAPQ12770 1279 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 EDRF1Q3B7T1 1238 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 CCNI2Q6ZMN8 369 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-215ENST00000555964 RNF139Q8WU17 664 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 SPATA32Q96LK8 384 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
XRCC3-215ENST00000555964 LHX5Q9H2C1 402 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 CCDC86Q9H6F5 360 aaKnown RBP17.72■□□□□ 0.43
XRCC3-215ENST00000555964 LRRC4Q9HBW1 653 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 TM7SF3Q9NS93 570 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 RAB20Q9NX57 234 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 KIAA1522Q9P206 1035 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-215ENST00000555964 HESX1Q9UBX0 185 aa17.72■□□□□ 0.43
XRCC3-215ENST00000555964 FASNP49327 2511 aaKnown RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 APC2O95996 2303 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 KCNJ18B7U540 433 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 XPO1O14980 1071 aaKnown RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 CBFA2T3O75081 653 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 TKTL1P51854 596 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 COPAP53621 1224 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 RAD23BP54727 409 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 ZBTB16Q05516 673 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 COL9A2Q14055 689 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 TRIP4Q15650 581 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 TTC31Q49AM3 519 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 FNDC3BQ53EP0 1204 aaKnown RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 PM20D1Q6GTS8 502 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 FMNL3Q8IVF7 1028 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 SLC4A11Q8NBS3 891 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 SNX19Q92543 992 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 ARID3AQ99856 593 aa17.71■□□□□ 0.43
XRCC3-215ENST00000555964 IRX2Q9BZI1 471 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 EIF2B4Q9UI10 523 aaKnown RBP17.71■□□□□ 0.43
XRCC3-215ENST00000555964 CETN3O15182 167 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 HOXD9P28356 352 aaPredicted RBP17.7■□□□□ 0.42
XRCC3-215ENST00000555964 BST2Q10589 180 aaKnown RBP17.7■□□□□ 0.42
XRCC3-215ENST00000555964 DPYDQ12882 1025 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 CAMK2GQ13555 558 aaPredicted RBP17.7■□□□□ 0.42
XRCC3-215ENST00000555964 ACAP1Q15027 740 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 HLA-BQ31612 363 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 CACUL1Q86Y37 369 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 AHI1Q8N157 1196 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 SIX6OS1Q8N1H7 587 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 RBBP8NLQ8NC74 664 aaPredicted RBP17.7■□□□□ 0.42
XRCC3-215ENST00000555964 GOLGA1Q92805 767 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 P2RY11Q96G91 374 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 ULBP1Q9BZM6 244 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 MAPK8IP1Q9UQF2 711 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 KNTC1P50748 2209 aa17.7■□□□□ 0.42
XRCC3-215ENST00000555964 TMEM131Q92545 1883 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 MUC22E2RYF6 1773 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 ZZEF1O43149 2961 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 FAM237AA0A1B0GTK4 181 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 ATP5BP06576 529 aaKnown RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 MCCD1P59942 119 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 SFSWAPQ12872 951 aaKnown RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 GOLGA7BQ2TAP0 167 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 INAVAQ3KP66 663 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 SGO2Q562F6 1265 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 ADGRF1Q5T601 910 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 BTBD1Q9H0C5 482 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 OSGEPQ9NPF4 335 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 ABCC13Q9NSE7 274 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 STOML2Q9UJZ1 356 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 TSPAN16Q9UKR8 245 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 FNDC3AQ9Y2H6 1198 aaKnown RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
XRCC3-215ENST00000555964 TP53BP1Q12888 1972 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-215ENST00000555964 SEMA4FO95754 770 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms