RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 NCR1O76036 304 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ONECUT2O95948 504 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 WEE2P0C1S8 567 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 HSPA1AP0DMV8 641 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 HSPA1BP0DMV9 641 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ACADMP11310 421 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ACP5P13686 325 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF37AP17032 561 aaPredicted RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 PRKCHP24723 683 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ADRA1DP25100 572 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 PSMA4P25789 261 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 DDX6P26196 483 aaKnown RBP eCLIP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 GKP32189 559 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 GGT5P36269 586 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 GPD2P43304 727 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 HNRNPMP52272 730 aaKnown RBP eCLIP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 NXPH1P58417 271 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 SUMO2P61956 95 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM189BP81408 668 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 POU5F1Q01860 360 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 EIF4A2Q14240 407 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM187BQ17R55 369 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 BEAN1Q3B7T3 259 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 HS1BP3Q53T59 392 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 RABL3Q5HYI8 236 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM69AQ5T7M9 428 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF618Q5T7W0 954 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 SNX30Q5VWJ9 437 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 OGFOD2Q6N063 350 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ACSM6Q6P461 480 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 INO80CQ6PI98 192 aaPredicted RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 C16orf89Q6UX73 402 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ATF7IPQ6VMQ6 1270 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 MAVSQ7Z434 540 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 LIMS2Q7Z4I7 341 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 TMPRSS6Q8IU80 811 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 DIS3L2Q8IYB7 885 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 OTUD6BQ8N6M0 293 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 POU5F2Q8N7G0 328 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 LSM14AQ8ND56 463 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 CPEB3Q8NE35 698 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 Q8TCH9 128 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 CREB3L4Q8TEY5 395 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 GLMPQ8WWB7 406 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 EDAQ92838 391 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 FKBP10Q96AY3 582 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 CTHRC1Q96CG8 243 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 R3HDM4Q96D70 268 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 MASTLQ96GX5 879 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 TSPAN18Q96SJ8 248 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 NPAS1Q99742 590 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 HERC2P3Q9BVR0 1158 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ARHGAP39Q9C0H5 1083 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 GHITMQ9H3K2 345 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF768Q9H5H4 540 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 PDE11AQ9HCR9 933 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 PPP1R14DQ9NXH3 145 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 TAS2R10Q9NYW0 307 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 TBC1D14Q9P2M4 693 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 SLC12A4Q9UP95 1085 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 NAALADL1Q9UQQ1 740 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 SH2B3Q9UQQ2 575 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 ENTPD2Q9Y5L3 495 aa3.31□□□□□ -1.88
MTHFD1-212ENST00000555858 FER1L4A9Z1Z3 1794 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 GOLGA6L10A0A0M3HER8 536 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 GAGE10A6NGK3 116 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SH2D7A6NKC9 451 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 C3orf70A6NLC5 250 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CCER2I3L3R5 266 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 MUSKO15146 869 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 PROM1O43490 865 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ORC4O43929 436 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TMPRSS11DO60235 418 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF623O75123 536 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 PTP4A3O75365 173 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 NXPH3O95157 252 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ALDOAP04075 364 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CLEC3BP05452 202 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 FESP07332 822 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 RHOP08100 348 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 IL6RP08887 468 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CREB1P16220 341 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 MATN1P21941 496 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 RRM1P23921 792 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 EPHA8P29322 1005 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 MCM5P33992 734 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 HOXD12P35452 270 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 COPB2P35606 906 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ARL3P36405 182 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 BMPR1AP36894 532 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 IGHMBP2P38935 993 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CLCN2P51788 898 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 FOXL2P58012 376 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TAS2R50P59544 299 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 GOLGA8FQ08AF8 430 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 PTP4A2Q12974 167 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 MPP3Q13368 585 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 MAMLD1Q13495 774 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 DNASE1L3Q13609 305 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CUL4AQ13619 759 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms