RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 RASSF1Q9NS23 344 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 TRIM43BA6NCK2 446 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 POM121BA6NF01 834 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 PYCARD-AS1I3L0S3 204 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 FRS3O43559 492 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 RGS10O43665 173 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 SNHG28P0DPA3 235 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 CREB1P16220 341 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 MCCP23508 829 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 ZDHHC24Q6UX98 284 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 DEF8Q6ZN54 512 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 ZDHHC17Q8IUH5 632 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 LIX1LQ8IVB5 337 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 SYTL1Q8IYJ3 562 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 ZNF527Q8NB42 609 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 MAFAQ8NHW3 353 aaPredicted RBP6.01□□□□□ -1.45
VRK1-203ENST00000555067 MAP4K1Q92918 833 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 TRIM43Q96BQ3 446 aaPredicted RBP6.01□□□□□ -1.45
VRK1-203ENST00000555067 NMD3Q96D46 503 aaKnown RBP6.01□□□□□ -1.45
VRK1-203ENST00000555067 HS6ST2Q96MM7 605 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 TTLL2Q9BWV7 592 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 BLOC1S4Q9NUP1 217 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 GRHPRQ9UBQ7 328 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 LPAR3Q9UBY5 353 aa6.01□□□□□ -1.45
VRK1-203ENST00000555067 MAGED2Q9UNF1 606 aaPredicted RBP6.01□□□□□ -1.45
VRK1-203ENST00000555067 ITIH6Q6UXX5 1313 aa6□□□□□ -1.45
VRK1-203ENST00000555067 LY6G6EA0A0G2JKS1 128 aa6□□□□□ -1.45
VRK1-203ENST00000555067 ISM1B1AKI9 464 aa6□□□□□ -1.45
VRK1-203ENST00000555067 EIF3FO00303 357 aaPredicted RBP6□□□□□ -1.45
VRK1-203ENST00000555067 ADAM10O14672 748 aa6□□□□□ -1.45
VRK1-203ENST00000555067 SPRY2O43597 315 aa6□□□□□ -1.45
VRK1-203ENST00000555067 RRP9O43818 475 aaKnown RBP6□□□□□ -1.45
VRK1-203ENST00000555067 FGF18O76093 207 aa6□□□□□ -1.45
VRK1-203ENST00000555067 PDIA3P30101 505 aaKnown RBP6□□□□□ -1.45
VRK1-203ENST00000555067 TERF1P54274 439 aa6□□□□□ -1.45
VRK1-203ENST00000555067 NUCB1Q02818 461 aa6□□□□□ -1.45
VRK1-203ENST00000555067 STARD3Q14849 445 aa6□□□□□ -1.45
VRK1-203ENST00000555067 FAAH2Q6GMR7 532 aa6□□□□□ -1.45
VRK1-203ENST00000555067 SMCR8Q8TEV9 937 aaPredicted RBP6□□□□□ -1.45
VRK1-203ENST00000555067 BRI3BPQ8WY22 251 aa6□□□□□ -1.45
VRK1-203ENST00000555067 SIGLEC11Q96RL6 698 aa6□□□□□ -1.45
VRK1-203ENST00000555067 SEC62Q99442 399 aaKnown RBP6□□□□□ -1.45
VRK1-203ENST00000555067 CENPOQ9BU64 300 aa6□□□□□ -1.45
VRK1-203ENST00000555067 SLC26A6Q9BXS9 759 aa6□□□□□ -1.45
VRK1-203ENST00000555067 DHX36Q9H2U1 1008 aaKnown RBP6□□□□□ -1.45
VRK1-203ENST00000555067 EBF3Q9H4W6 596 aa6□□□□□ -1.45
VRK1-203ENST00000555067 VPS45Q9NRW7 570 aa6□□□□□ -1.45
VRK1-203ENST00000555067 IFT80Q9P2H3 777 aaPredicted RBP6□□□□□ -1.45
VRK1-203ENST00000555067 MGAT4CQ9UBM8 478 aa6□□□□□ -1.45
VRK1-203ENST00000555067 ZMYM2Q9UBW7 1377 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 FAM90A10PA6NDY2 464 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 PRR23D1E9PI22 279 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 RASSF9O75901 435 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 PRR23D2P0DMB1 279 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 PRF1P14222 555 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 TSHRP16473 764 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 HOXD9P28356 352 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 SUMO3P55854 103 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 ID2Q02363 134 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 SRSF1Q07955 248 aaKnown RBP eCLIP5.99□□□□□ -1.45
VRK1-203ENST00000555067 KCNB1Q14721 858 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 ALDH1L2Q3SY69 923 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 RANBP10Q6VN20 620 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 IRF2BP2Q7Z5L9 587 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 NSMCE1Q8WV22 266 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 USP13Q92995 863 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 WDYHV1Q96HA8 205 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 VCPIP1Q96JH7 1222 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 ZNF668Q96K58 619 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 TMEM120AQ9BXJ8 343 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 LRRC27Q9C0I9 530 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 SACM1LQ9NTJ5 587 aa5.99□□□□□ -1.45
VRK1-203ENST00000555067 RGS17Q9UGC6 210 aaPredicted RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 AFF4Q9UHB7 1163 aaKnown RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 NOL7Q9UMY1 257 aaKnown RBP5.99□□□□□ -1.45
VRK1-203ENST00000555067 H7C4K7 107 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 FFAR2O15552 330 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 PIAS2O75928 621 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 BRAFP15056 766 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 CD19P15391 556 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 VEGFAP15692 232 aaPredicted RBP5.98□□□□□ -1.45
VRK1-203ENST00000555067 SCP2P22307 547 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 THBS4P35443 961 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 PTDSS1P48651 473 aaKnown RBP5.98□□□□□ -1.45
VRK1-203ENST00000555067 HSPA7P48741 367 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 PGDP52209 483 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 CFHR3Q02985 330 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 CFHR1Q03591 330 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 ZNF91Q05481 1191 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 GALNT1Q10472 559 aaPredicted RBP5.98□□□□□ -1.45
VRK1-203ENST00000555067 PMS2P11Q13670 270 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 ARHGEF7Q14155 803 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 POSTNQ15063 836 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 TAF5Q15542 800 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 AWAT1Q58HT5 328 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 TMTC4Q5T4D3 741 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 C1QTNF12Q5T7M4 302 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 ARMC3Q5W041 872 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 FAM43BQ6ZT52 329 aaPredicted RBP5.98□□□□□ -1.45
VRK1-203ENST00000555067 KCTD20Q7Z5Y7 419 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms