RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CHD7Q9P2D1 2997 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 GOLGA6L10A0A0M3HER8 536 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 KCNU1A8MYU2 1149 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 TJP3O95049 919 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 LATS1O95835 1130 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 CKMP06732 381 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 GTF2F1P35269 517 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 SLC11A2P49281 568 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 ARSEP51690 589 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 ITIH3Q06033 890 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 ADAM15Q13444 863 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 TFDP2Q14188 446 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 LONRF2Q1L5Z9 754 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 ATP13A4Q4VNC1 1196 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 PRSS36Q5K4E3 855 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 RARS2Q5T160 578 aaKnown RBP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 TXNDC8Q6A555 127 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 CES5AQ6NT32 575 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 GPR153Q6NV75 609 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 MFSD7Q6UXD7 560 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 TMC5Q6UXY8 1006 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 GPR149Q86SP6 731 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 ARL14EPQ8N8R7 260 aaPredicted RBP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 MAB21L3Q8N8X9 362 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 RAPGEF5Q92565 580 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 AZIN2Q96A70 460 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 EPAS1Q99814 870 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 DDX50Q9BQ39 737 aaKnown RBP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 CALN1Q9BXU9 219 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 GPATCH2LQ9NWQ4 482 aa14.89□□□□□ -0.03
SHOX2-206ENST00000554685 LSM7Q9UK45 103 aaKnown RBP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 MRPS23Q9Y3D9 190 aaKnown RBP14.89□□□□□ -0.03
SHOX2-206ENST00000554685 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 ZNF185O15231 689 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 GLP2RO95838 553 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 FGGP02679 453 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 HMBSP08397 361 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 ZFXP17010 805 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 IGFBP4P22692 258 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 L1CAMP32004 1257 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 AVPR1AP37288 418 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 CDKN2BP42772 138 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 RBM10P98175 930 aaKnown RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 NRG1Q02297 640 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 DPYSL3Q14195 570 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 TAZQ16635 292 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 PPP6R3Q5H9R7 873 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 SLC13A5Q86YT5 568 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 C12orf76Q8N812 135 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 C1orf74Q96LT6 269 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 KLF16Q9BXK1 252 aaPredicted RBP14.88□□□□□ -0.03
SHOX2-206ENST00000554685 SLITRK6Q9H5Y7 841 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 STIM2Q9P246 746 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 ATG2AQ2TAZ0 1938 aa14.88□□□□□ -0.03
SHOX2-206ENST00000554685 hCG_1818297A0A087WSY0 165 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 C3orf70A6NLC5 250 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-206ENST00000554685 EEF2KO00418 725 aaKnown RBP14.87□□□□□ -0.03
SHOX2-206ENST00000554685 PAGE1O75459 146 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 MOCS2O96007 188 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-206ENST00000554685 CCR2P41597 374 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 HCAR3P49019 387 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 TPI1P60174 286 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 TEAD2Q15562 447 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 LRRC31Q6UY01 552 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 ZNF572Q7Z3I7 529 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-206ENST00000554685 RFX6Q8HWS3 928 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 TTC13Q8NBP0 860 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 FAF2Q96CS3 445 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 RIPOR3Q96MK2 946 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 KCTD15Q96SI1 283 aaPredicted RBP14.87□□□□□ -0.03
SHOX2-206ENST00000554685 RNF38Q9H0F5 515 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 HOMER3Q9NSC5 361 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 DONSONQ9NYP3 566 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 OR12D3Q9UGF7 316 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 ARHGAP26Q9UNA1 814 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 ZNF510Q9Y2H8 683 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 CPQQ9Y646 472 aa14.87□□□□□ -0.03
SHOX2-206ENST00000554685 RANBP2P49792 3224 aaKnown RBP14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CTAGE15A4D2H0 777 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CCDC188H7C350 402 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 SOX1O00570 391 aaPredicted RBP14.86□□□□□ -0.03
SHOX2-206ENST00000554685 LINC01565O15544 149 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 DAPK3O43293 454 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CREB3O43889 395 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 ACSL4O60488 711 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 MOSPD3O75425 235 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 STC2O76061 302 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CTAGE8P0CG41 777 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 GJA1P17302 382 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 FSHRP23945 695 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 WEE1P30291 646 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 MTHFRP42898 656 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 MLLT6P55198 1093 aaPredicted RBP14.86□□□□□ -0.03
SHOX2-206ENST00000554685 TUBB4BP68371 445 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 NTHL1P78549 312 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 SEMA3BQ13214 749 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms