RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 FAM167BQ9BTA0 163 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 ELAC1Q9H777 363 aaKnown RBP4.68□□□□□ -1.66
SEC23A-205ENST00000553925 MLXIPQ9HAP2 919 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 USP29Q9HBJ7 922 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 SEPSECSQ9HD40 501 aaKnown RBP4.68□□□□□ -1.66
SEC23A-205ENST00000553925 KCNK9Q9NPC2 374 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 C9orf78Q9NZ63 289 aaPredicted RBP4.68□□□□□ -1.66
SEC23A-205ENST00000553925 ASAP1Q9ULH1 1129 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 INSL6Q9Y581 213 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 WNT6Q9Y6F9 365 aa4.68□□□□□ -1.66
SEC23A-205ENST00000553925 EXOC3O60645 756 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 PPP6R2O75170 966 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 SLC3A2P08195 630 aaKnown RBP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 CDK7P50613 346 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 CYP4F2P78329 520 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 SF3A3Q12874 501 aaKnown RBP eCLIP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 ZNF569Q5MCW4 686 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 ANKRD45Q5TZF3 282 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 SUMO4Q6EEV6 95 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 LINC01465Q8N7H1 131 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 OR52L2PQ8NGH6 319 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 HMGB4Q8WW32 186 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 THAP4Q8WY91 577 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 C3orf49Q96BT1 292 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 SARAFQ96BY9 339 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 TBC1D20Q96BZ9 403 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 GCC1Q96CN9 775 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 FYTTD1Q96QD9 318 aaKnown RBP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 RNF26Q9BY78 433 aaPredicted RBP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 BRD8Q9H0E9 1235 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 CCDC134Q9H6E4 229 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 ALG13Q9NP73 1137 aaKnown RBP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 ASB6Q9NWX5 421 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 NDUFAF4Q9P032 175 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 KIF17Q9P2E2 1029 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 SRP68Q9UHB9 627 aaKnown RBP4.67□□□□□ -1.66
SEC23A-205ENST00000553925 DAPP1Q9UN19 280 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 CNTN6Q9UQ52 1028 aa4.67□□□□□ -1.66
SEC23A-205ENST00000553925 CCDC187A0A096LP49 1063 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM90A18PA6NE21 464 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM90A16PA6NEW6 464 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM90A9PA6NNJ1 464 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM90A5PA8MXJ8 464 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 KIF28PB7ZC32 967 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 BTBD19C9JJ37 291 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 UBE2Q2LH0YL09 131 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 ZNF213O14771 459 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 GCATO75600 419 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM90A15PP0C7V4 464 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM90A14PP0C7W9 464 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 ITPKBP27987 946 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 DUSP1P28562 367 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 SERPINA4P29622 427 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 THBS4P35443 961 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 CASP2P42575 452 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 MCM2P49736 904 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 JAK3P52333 1124 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 COPB1P53618 953 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 PNLIPRP1P54315 467 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 GEMIN4P57678 1058 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 GPC5P78333 572 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 RAE1P78406 368 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 HOXA4Q00056 320 aaPredicted RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 CFHR3Q02985 330 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 RNASELQ05823 741 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 FAM187BQ17R55 369 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 TTC22Q5TAA0 569 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 ANKRD40Q6AI12 368 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 ACSM6Q6P461 480 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 VSTM1Q6UX27 236 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 SERPINA13PQ6UXR4 307 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 KRBA2Q6ZNG9 492 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 BCDIN3DQ7Z5W3 292 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 AMIGO2Q86SJ2 522 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 TMTC2Q8N394 836 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 OR1N1Q8NGS0 311 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 OR6Y1Q8NGX8 325 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 MAFAQ8NHW3 353 aaPredicted RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 SCAMP5Q8TAC9 235 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 GLMPQ8WWB7 406 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 EDC3Q96F86 508 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 TRAPPC9Q96Q05 1148 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 KLK15Q9H2R5 256 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 SAP30LQ9HAJ7 183 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 IL17RBQ9NRM6 502 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 VPS45Q9NRW7 570 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 LIN7CQ9NUP9 197 aaKnown RBP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 TMLHEQ9NVH6 421 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 SH3BP4Q9P0V3 963 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.66□□□□□ -1.66
SEC23A-205ENST00000553925 PCDHB7Q9Y5E2 793 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 PCDHB2Q9Y5E7 798 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 PCDHGB3Q9Y5G1 929 aa4.66□□□□□ -1.66
SEC23A-205ENST00000553925 C3orf70A6NLC5 250 aaPredicted RBP4.65□□□□□ -1.67
SEC23A-205ENST00000553925 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.67
SEC23A-205ENST00000553925 TTC34A8MYJ7 566 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms