RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TULP2O00295 520 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 ENC1O14682 589 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 TRIM66O15016 1216 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 ECI2O75521 394 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 ATP1A1P05023 1023 aaKnown RBP15.1■□□□□ 0.01
SHMT2-208ENST00000553868 CHRNB1P11230 501 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 LCP1P13796 627 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 CCDC142Q17RM4 750 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 PRSS55Q6UWB4 352 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-208ENST00000553868 OLFML1Q6UWY5 402 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 Q6ZS52 159 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 SLC26A9Q7LBE3 791 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 ARCQ7LC44 396 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 PDZD3Q86UT5 571 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 SMOQ99835 787 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 TRIM62Q9BVG3 475 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 CNGB3Q9NQW8 809 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 METTL5Q9NRN9 209 aaKnown RBP15.1■□□□□ 0.01
SHMT2-208ENST00000553868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHMT2-208ENST00000553868 TMLHEQ9NVH6 421 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 ABI2Q9NYB9 513 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-208ENST00000553868 FBXW11Q9UKB1 542 aa15.1■□□□□ 0.01
SHMT2-208ENST00000553868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHMT2-208ENST00000553868 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 C4orf47A7E2U8 309 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 CES2O00748 559 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 MAN2B1O00754 1011 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 PAPSS1O43252 624 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-208ENST00000553868 EPN2O95208 641 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 C8AP07357 584 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 GLI1P08151 1106 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 OR4Q2P0C623 313 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 COMTP21964 271 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 GRIK1P39086 918 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 TKTL1P51854 596 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 ARPP19P56211 112 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 ADIGQ0VDE8 80 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 WHAMMP3Q1A5X7 153 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 PLA2G2CQ5R387 149 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 PPM1LQ5SGD2 360 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 SLC8B1Q6J4K2 584 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 KBTBD6Q86V97 674 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 SCUBE3Q8IX30 993 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 NIPA2Q8N8Q9 360 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 GOLGA1Q92805 767 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 C8orf48Q96LL4 319 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 CEP295NLQ96MC4 621 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 IER2Q9BTL4 223 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 TLR10Q9BXR5 811 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 ASNSD1Q9NWL6 643 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 TJP2Q9UDY2 1190 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 CDC23Q9UJX2 597 aa15.09■□□□□ 0.01
SHMT2-208ENST00000553868 PIK3R2O00459 728 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 FANCGO15287 622 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 HYAL3O43820 417 aaPredicted RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 HSF2BPO75031 334 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 RNF8O76064 485 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 BEST1O76090 585 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 GPD1P21695 349 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 PSMA2P25787 234 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 RFC1P35251 1148 aaPredicted RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 PXNP49023 591 aaPredicted RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 RPL7AP62424 266 aaKnown RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 RPL10AP62906 217 aaKnown RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 AMPD2Q01433 879 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 CKAP4Q07065 602 aaKnown RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 SLC5A9Q2M3M2 681 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 RAB41Q5JT25 222 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 TPGS2Q68CL5 300 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 SCML4Q8N228 414 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 ZMIZ2Q8NF64 920 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 IRGQQ8WZA9 623 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 DNASE1L2Q92874 299 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 HES6Q96HZ4 224 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 PBKQ96KB5 322 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 BTBD6Q96KE9 485 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 CNPY3Q9BT09 278 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 BRD9Q9H8M2 597 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 L2HGDHQ9H9P8 463 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 FNIP2Q9P278 1114 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 DNMT3BQ9UBC3 853 aaKnown RBP15.08■□□□□ 0
SHMT2-208ENST00000553868 RNF14Q9UBS8 474 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 MAFFQ9ULX9 164 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 GPSM3Q9Y4H4 160 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 CDY1Q9Y6F8 540 aa15.08■□□□□ 0
SHMT2-208ENST00000553868 MTMR11A4FU01 709 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 F8VP50 259 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 DPYSL4O14531 572 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 ZBED1O96006 694 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 CYP2F1P24903 491 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 CTNNA2P26232 953 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 SDC4P31431 198 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 OR1D2P34982 312 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 ZNF143P52747 638 aaPredicted RBP15.07■□□□□ 0
SHMT2-208ENST00000553868 COL28A1Q2UY09 1125 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 PABPC1LQ4VXU2 614 aaKnown RBP15.07■□□□□ 0
SHMT2-208ENST00000553868 SCN4BQ8IWT1 228 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 SPEM1Q8N4L4 309 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 JOSD2Q8TAC2 188 aa15.07■□□□□ 0
SHMT2-208ENST00000553868 OSBPL9Q96SU4 736 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms