RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 CCNT1O60563 726 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TOM1L1O75674 476 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TCEA3O75764 348 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 BAG4O95429 457 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 CISD3P0C7P0 127 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 PRKCSHP14314 528 aaPredicted RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 ACO1P21399 889 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SLC6A4P31645 630 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TRAPPC10P48553 1259 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TAF6P49848 677 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 WDR4P57081 412 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 NR5A1Q13285 461 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 EIF3IQ13347 325 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 LACTB2Q53H82 288 aaPredicted RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TPGS1Q6ZTW0 290 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TAS1R3Q7RTX0 852 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SPATS2Q86XZ4 545 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 ADGRF2Q8IZF7 708 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 BLIDQ8IZY5 108 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SLC25A45Q8N413 288 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 LRRN4Q8WUT4 740 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 KIFAP3Q92845 792 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SERAC1Q96JX3 654 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 ZBTB45Q96K62 511 aaPredicted RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SPATA17Q96L03 361 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 CEP295NLQ96MC4 621 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 HEXIM2Q96MH2 286 aaKnown RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SLITRK1Q96PX8 696 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TSPAN18Q96SJ8 248 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 OCSTAMPQ9BR26 566 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TTLL2Q9BWV7 592 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 RNF26Q9BY78 433 aaPredicted RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 CCSER1Q9C0I3 900 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 TMEM245Q9H330 911 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 EBF2Q9HAK2 575 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 SH3GLB2Q9NR46 395 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 GTF3C4Q9UKN8 822 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 ITGB1BP2Q9UKP3 347 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 NAP1L2Q9ULW6 460 aaPredicted RBP6.52□□□□□ -1.37
LINC02406-201ENST00000553029 PCDHB11Q9Y5F2 797 aa6.52□□□□□ -1.37
LINC02406-201ENST00000553029 ARHGAP10A1A4S6 786 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 LACTBL1A8MY62 500 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 COCHO43405 550 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 MAGEC1O60732 1142 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 IRF1P10914 325 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 ACAT1P24752 427 aaKnown RBP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 ANXA13P27216 316 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 MAGEA11P43364 429 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 MFAP3P55082 362 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 MCL1Q07820 350 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 CCDC142Q17RM4 750 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 GEN1Q17RS7 908 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 MRPL14Q6P1L8 145 aaKnown RBP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 VSTM1Q6UX27 236 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 CCDC83Q8IWF9 413 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 FBXO39Q8N4B4 442 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 TPCN2Q8NHX9 752 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 PDCD6IPQ8WUM4 868 aaKnown RBP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 BHMTQ93088 406 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 ITPKCQ96DU7 683 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 PKMYT1Q99640 499 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 NAP1L4Q99733 375 aaKnown RBP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 ACBD6Q9BR61 282 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 SLC12A9Q9BXP2 914 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 SLC26A6Q9BXS9 759 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 ZFAND3Q9H8U3 227 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 FBRSQ9HAH7 460 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 CYLDQ9NQC7 956 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 DDX43Q9NXZ2 648 aaKnown RBP6.51□□□□□ -1.37
LINC02406-201ENST00000553029 ARHGAP28Q9P2N2 729 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 SEL1LQ9UBV2 794 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 PCDHA12Q9UN75 941 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 NCKAP1Q9Y2A7 1128 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 SLC27A6Q9Y2P4 619 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 SNX14Q9Y5W7 946 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 TMEM131Q92545 1883 aa6.51□□□□□ -1.37
LINC02406-201ENST00000553029 LY6G6EA0A0G2JKS1 128 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 LRRC72A6NJI9 287 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 CLDN3O15551 220 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 SGSM2O43147 1006 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 LDLRP01130 860 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 RARGP13631 454 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 DGKAP23743 735 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 MATR3P43243 847 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC02406-201ENST00000553029 NPTX2P47972 431 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 HARS2P49590 506 aaKnown RBP6.5□□□□□ -1.37
LINC02406-201ENST00000553029 PDX1P52945 283 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 PEX3P56589 373 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 RPS14P62263 151 aaKnown RBP6.5□□□□□ -1.37
LINC02406-201ENST00000553029 NOP14P78316 857 aaKnown RBP6.5□□□□□ -1.37
LINC02406-201ENST00000553029 ARID5AQ03989 594 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 TAF10Q12962 218 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 EIF4HQ15056 248 aaKnown RBP6.5□□□□□ -1.37
LINC02406-201ENST00000553029 SV2CQ496J9 727 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 JADE1Q6IE81 842 aa6.5□□□□□ -1.37
LINC02406-201ENST00000553029 NAPEPLDQ6IQ20 393 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms