RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	CAVIN1	Q6NZI2	390 aa	Known RBP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	FAM171B	Q6P995	826 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	SASS6	Q6UVJ0	657 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	SCARA5	Q6ZMJ2	495 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	DCP1B	Q8IZD4	617 aa	Known RBP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	TTC9B	Q8N6N2	239 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	CCDC150	Q8NCX0	1101 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	SPPL2B	Q8TCT7	592 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	GIPC2	Q8TF65	315 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	CCDC120	Q96HB5	630 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	FAXDC2	Q96IV6	333 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422		Q96M66	194 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	ALPK1	Q96QP1	1244 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	UHRF1	Q96T88	793 aa	Predicted RBP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	SYT15	Q9BQS2	421 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	PHF7	Q9BWX1	381 aa	Predicted RBP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	SDCBP2	Q9H190	292 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	THAP9	Q9H5L6	903 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	APOBEC3G	Q9HC16	384 aa	Known RBP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	WDR6	Q9NNW5	1121 aa	Known RBP	7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	CRTAC1	Q9NQ79	661 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	ANO10	Q9NW15	660 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	RAB20	Q9NX57	234 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	REV1	Q9UBZ9	1251 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	CDH9	Q9ULB4	789 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	YIPF1	Q9Y548	306 aa		7.07	□□□□□ -1.28
CNOT2-238	ENST00000552422	MYBPHL	A2RUH7	354 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	LOC730098	B7Z3J9	87 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	P4HA2	O15460	535 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	ATP2C2	O75185	946 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	HTR3B	O95264	441 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	AFP	P02771	609 aa	Known RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	ATF6	P18850	670 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	GNL1	P36915	607 aa	Predicted RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	RAP1GAP	P47736	663 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	TUFM	P49411	452 aa	Known RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	EPHA5	P54756	1037 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	CDH8	P55286	799 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	TWF1	Q12792	350 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	PLD1	Q13393	1074 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	MPP2	Q14168	576 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	MAPRE1	Q15691	268 aa	Known RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	TPD52L1	Q16890	204 aa	Predicted RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	FYB2	Q5VWT5	728 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	C11orf57	Q6ZUT1	292 aa	Predicted RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	TMPRSS7	Q7RTY8	843 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	FAM114A1	Q8IWE2	563 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	ELMOD1	Q8N336	334 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	B3GALNT2	Q8NCR0	500 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	OR6B3	Q8NGW1	331 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	LMO3	Q8TAP4	145 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	MYCBPAP	Q8TBZ2	947 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	ENOX1	Q8TC92	643 aa	Known RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	MYLPF	Q96A32	169 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	SNX25	Q9H3E2	840 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	TRIT1	Q9H3H1	467 aa	Known RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	DPEP3	Q9H4B8	488 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	FAM124B	Q9H5Z6	455 aa	Predicted RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	CYP3A43	Q9HB55	503 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	TMLHE	Q9NVH6	421 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	HCFC1R1	Q9NWW0	138 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	SLAMF8	Q9P0V8	285 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	CEP72	Q9P209	647 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	HMGXB4	Q9UGU5	601 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	GTF3C4	Q9UKN8	822 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	NR2E1	Q9Y466	385 aa		7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	7.06	□□□□□ -1.28
CNOT2-238	ENST00000552422	KMT2E	Q8IZD2	1858 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	GTPBP10	A4D1E9	387 aa	Known RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	LRRC10B	A6NIK2	292 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422		A8MXQ7	604 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	C2CD4D	B7Z1M9	353 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	SOAT2	O75908	522 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	RHO	P08100	348 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	PDGFRB	P09619	1106 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	HAPLN1	P10915	354 aa	Predicted RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	PTPN2	P17706	415 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	PTPN1	P18031	435 aa	Known RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	SP100	P23497	879 aa	Predicted RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	CYP2F1	P24903	491 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	EEF1G	P26641	437 aa	Known RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	TPP2	P29144	1249 aa	Predicted RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	GDNF	P39905	211 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	MAGEA11	P43364	429 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	ALDH1A3	P47895	512 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	CDR1	P51861	262 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	NDST1	P52848	882 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	EPHB3	P54753	998 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	MYL5	Q02045	173 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	CETN1	Q12798	172 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	CUL2	Q13617	745 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	MAN2A1	Q16706	1144 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	SLC5A9	Q2M3M2	681 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	MGAT5B	Q3V5L5	792 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	PABPC1L	Q4VXU2	614 aa	Known RBP	7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	TCP11X2	Q5H9J9	407 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	MDH1B	Q5I0G3	518 aa		7.05	□□□□□ -1.28
CNOT2-238	ENST00000552422	MIIP	Q5JXC2	388 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms