RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 CRLF3Q8IUI8 442 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 STKLD1Q8NE28 680 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 APPL2Q8NEU8 664 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 WDR60Q8WVS4 1066 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 KBTBD7Q8WVZ9 684 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 USP6NLQ92738 828 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 CLPTM1LQ96KA5 538 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 EBF4Q9BQW3 602 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 VTA1Q9NP79 307 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PNPLA8Q9NP80 782 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 TAS2R1Q9NYW7 299 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PCDHA11Q9Y5I1 949 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 PSAT1Q9Y617 370 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 CEP350Q5VT06 3117 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
UBE2N-205ENST00000550657 SMIM28A0A1B0GU29 152 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 M0QYT0 321 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 WFS1O76024 890 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 BEST1O76090 585 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ERVK-10P10266 1014 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 PGM1P36871 562 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SOX4Q06945 474 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 STX3Q13277 289 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 UBAP2LQ14157 1087 aaKnown RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 MUM1Q2TAK8 710 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 PPM1JQ5JR12 505 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 C4orf50Q6ZRC1 276 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 TREML1Q86YW5 311 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SMC1BQ8NDV3 1235 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 TMEM40Q8WWA1 233 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 P2RY11Q96G91 374 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 NAF1Q96HR8 494 aaKnown RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 FAM161BQ96MY7 647 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 QKIQ96PU8 341 aaKnown RBP eCLIP9.48□□□□□ -0.896e-8■■■■□ 23.6
UBE2N-205ENST00000550657 TIMM13Q9Y5L4 95 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 MEI4A8MW99 385 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 TPP1O14773 563 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 HUS1O60921 280 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 GCATO75600 419 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SETSIPP0DME0 302 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ZFXP17010 805 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 GNAZP19086 355 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 PAX7P23759 505 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SARNPP82979 210 aaKnown RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 FASTKD1Q53R41 847 aaKnown RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 N4BP2L1Q5TBK1 243 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SLC26A9Q7LBE3 791 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 PID1Q7Z2X4 250 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 RSPH3Q86UC2 560 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 HACE1Q8IYU2 909 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ADGRF2Q8IZF7 708 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 TEX9Q8N6V9 391 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 STMN2Q93045 179 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 MIEF2Q96C03 454 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 APOL2Q9BQE5 337 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ADAMTS10Q9H324 1103 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ARHGEF4Q9NR80 690 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 TXNDC16Q9P2K2 825 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 LNPEPQ9UIQ6 1025 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 FAM159BA6NKW6 160 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 BTBD19C9JJ37 291 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 CAPN9O14815 690 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ITM2AO43736 263 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SMIM10L2AP0DMW4 78 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SMIM10L2BP0DMW5 78 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 PTPN9P43378 593 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 THOC5Q13769 683 aaKnown RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 HSF5Q4G112 596 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ACSBG2Q5FVE4 666 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 WASHC2DQ5SRD0 308 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SYPL2Q5VXT5 272 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 HFE2Q6ZVN8 426 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ZNF410Q86VK4 478 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 RASSF3Q86WH2 238 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 NT5DC4Q86YG4 428 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SLC25A41Q8N5S1 370 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 MCUQ8NE86 351 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 AGR3Q8TD06 166 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 FBXO41Q8TF61 875 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 FRMD8Q9BZ67 464 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 PRDM12Q9H4Q4 367 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 LRRC4Q9HBW1 653 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 XPNPEP3Q9NQH7 507 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ACSS2Q9NR19 701 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ZNF358Q9NW07 568 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 SYBUQ9NX95 663 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 ZNF180Q9UJW8 692 aa9.48□□□□□ -0.89
UBE2N-205ENST00000550657 UBQLN1Q9UMX0 589 aaKnown RBP9.48□□□□□ -0.89
UBE2N-205ENST00000550657 LOC285556D6RIA3 1793 aa9.47□□□□□ -0.89
UBE2N-205ENST00000550657 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
UBE2N-205ENST00000550657 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
UBE2N-205ENST00000550657 CCL15-CCL14A0A0B4J2E2 113 aa9.47□□□□□ -0.89
UBE2N-205ENST00000550657 PRR5-ARHGAP8B1AHC4 643 aa9.47□□□□□ -0.89
UBE2N-205ENST00000550657 TRAFD1O14545 582 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-205ENST00000550657 GPR32O75388 356 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms