RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 FBXW11Q9UKB1 542 aa21.66■■□□□ 1.06
PRDM4-205ENST00000550376 KBTBD13C9JR72 458 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 KCNK1O00180 336 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 MSI1O43347 362 aaKnown RBP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 FKTNO75072 461 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 FAM107AO95990 144 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 KRT15P19012 456 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 YWHAGP61981 247 aaKnown RBP eCLIP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 DSC1Q08554 894 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 CDKL3Q8IVW4 592 aaPredicted RBP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 TFB1MQ8WVM0 346 aaKnown RBP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 RTP4Q96DX8 246 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 TSEN34Q9BSV6 310 aaKnown RBP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 SIK2Q9H0K1 926 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 PRDM12Q9H4Q4 367 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 WDCPQ9H6R7 721 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 TADA2AO75478 443 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 EOMESO95936 686 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 ERCC2P18074 760 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 SLC5A3P53794 718 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 SMAD1Q15797 465 aaKnown RBP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 MPP5Q8N3R9 675 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 HTR3CQ8WXA8 447 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 DEFB118Q96PH6 123 aa21.65■■□□□ 1.06
PRDM4-205ENST00000550376 FAM193BQ96PV7 902 aaPredicted RBP21.65■■□□□ 1.06
PRDM4-205ENST00000550376 E7ESA3 106 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 H3BRJ5 948 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 ENPP3O14638 875 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 DGKIO75912 1065 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 SRGAP2BP0DMP2 458 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 ZFXP17010 805 aaPredicted RBP21.64■■□□□ 1.06
PRDM4-205ENST00000550376 FAM189BP81408 668 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 OLIG2Q13516 323 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 CEP128Q6ZU80 1094 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 PRPF39Q86UA1 669 aaKnown RBP21.64■■□□□ 1.06
PRDM4-205ENST00000550376 SLAIN1Q8ND83 568 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 UROC1Q96N76 676 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 OLFM3Q96PB7 478 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 QKIQ96PU8 341 aaKnown RBP eCLIP21.64■■□□□ 1.06
PRDM4-205ENST00000550376 KLF6Q99612 283 aaPredicted RBP21.64■■□□□ 1.06
PRDM4-205ENST00000550376 CFHR5Q9BXR6 569 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 KLC2Q9H0B6 622 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.64■■□□□ 1.06
PRDM4-205ENST00000550376 LGALS13Q9UHV8 139 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 DSEQ9UL01 958 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 SQORQ9Y6N5 450 aa21.64■■□□□ 1.06
PRDM4-205ENST00000550376 EBAG9O00559 213 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 SELPP16109 830 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 NR2C2P49116 596 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 CCL23P55773 120 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 VSIG1Q86XK7 387 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 NPWQ8N729 165 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 ATP11CQ8NB49 1132 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 P2RY11Q96G91 374 aa21.64■■□□□ 1.05
PRDM4-205ENST00000550376 PAIP2Q9BPZ3 127 aaKnown RBP21.64■■□□□ 1.05
PRDM4-205ENST00000550376 CHADO15335 359 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 CRADDP78560 199 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 DPYSQ14117 519 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 ANKRD20A2Q5SQ80 823 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 ANKRD20A1Q5TYW2 823 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 ANKRD20A3Q5VUR7 823 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 PM20D1Q6GTS8 502 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 ARHGEF18Q6ZSZ5 1173 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 REM2Q8IYK8 340 aaPredicted RBP21.63■■□□□ 1.05
PRDM4-205ENST00000550376 ATAD1Q8NBU5 361 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 DQX1Q8TE96 717 aaKnown RBP21.63■■□□□ 1.05
PRDM4-205ENST00000550376 DYDC1Q8WWB3 177 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 NUP205Q92621 2012 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 GPR62Q9BZJ7 368 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 OR12D3Q9UGF7 316 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 TEX264Q9Y6I9 313 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.63■■□□□ 1.05
PRDM4-205ENST00000550376 GOLGA8RI6L899 631 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 CPLX4Q7Z7G2 160 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 LRRC34Q8IZ02 419 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 VPS52Q8N1B4 723 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 URGCPQ8TCY9 931 aa21.63■■□□□ 1.05
PRDM4-205ENST00000550376 C12orf65Q9H3J6 166 aaKnown RBP21.63■■□□□ 1.05
PRDM4-205ENST00000550376 CFAP69A5D8W1 941 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 ZNF487B1APH4 448 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 GCATO75600 419 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 FAM155BO75949 473 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 TPI1P60174 286 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 FAM171A1Q5VUB5 890 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 TADA2BQ86TJ2 420 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 CELF6Q96J87 481 aaKnown RBP21.62■■□□□ 1.05
PRDM4-205ENST00000550376 PAFAH2Q99487 392 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 NMUR1Q9HB89 426 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 PCDHB8Q9UN66 801 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 TCRBV9S1A1TA0A576 114 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 RNF103O00237 685 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 VIMP08670 466 aaKnown RBP21.62■■□□□ 1.05
PRDM4-205ENST00000550376 SPARCL1Q14515 664 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 TRABD2AQ86V40 505 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 FAM126BQ8IXS8 530 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 ABI1Q8IZP0 508 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 ZNF317Q96PQ6 595 aaPredicted RBP21.62■■□□□ 1.05
PRDM4-205ENST00000550376 MAD1L1Q9Y6D9 718 aa21.62■■□□□ 1.05
PRDM4-205ENST00000550376 DCLK1O15075 740 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms