RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 FAM110CQ1W6H9 321 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 GLE1Q53GS7 698 aaKnown RBP4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 ZNF569Q5MCW4 686 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 CC2D1BQ5T0F9 858 aaKnown RBP4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 GLCCI1Q86VQ1 547 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 OR4N4Q8N0Y3 316 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 NPIPB3Q92617 1050 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 AKAP1Q92667 903 aaKnown RBP eCLIP4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 C5orf34Q96MH7 638 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 SENP7Q9BQF6 1050 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 RTKNQ9BST9 563 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 NUAK2Q9H093 628 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 AGO4Q9HCK5 861 aaKnown RBP4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 LRFN1Q9P244 771 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 VPS4AQ9UN37 437 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 ZBTB1Q9Y2K1 713 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 PCDHB7Q9Y5E2 793 aa4.76□□□□□ -1.65
DEPDC4-205ENST00000548313 SPATA31A5Q5VU36 1347 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 SPATA31A7Q8IWB4 1347 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 WDR17Q8IZU2 1322 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 IFRD1O00458 451 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 ACKR2O00590 384 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 TCEA3O75764 348 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 RPP40O75818 363 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 ACTL6BO94805 426 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 CELA2AP08217 269 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 SFPQP23246 707 aaKnown RBP eCLIP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 TACR3P29371 465 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 AP2B1P63010 937 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 TLE3Q04726 772 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 AAK1Q2M2I8 961 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 TBRG1Q3YBR2 411 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 MEX3CQ5U5Q3 659 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 NFRKBQ6P4R8 1299 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 CCDC174Q6PII3 467 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 KLHL17Q6TDP4 642 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 KYAT3Q6YP21 454 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC44A2Q8IWA5 706 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 CCDC117Q8IWD4 279 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 SRRM1Q8IYB3 904 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 LAS2Q8IYD9 372 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 SRFBP1Q8NEF9 429 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 OTUD7AQ8TE49 926 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 REXO5Q96IC2 774 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 ZNF845Q96IR2 970 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 PRDM8Q9NQV8 689 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 CNTN6Q9UQ52 1028 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 FRMD4BQ9Y2L6 1034 aa4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 HEMK1Q9Y5R4 338 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM90A18PA6NE21 464 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM90A16PA6NEW6 464 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 C3orf70A6NLC5 250 aaPredicted RBP4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM90A9PA6NNJ1 464 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM90A5PA8MXJ8 464 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 TRIM38O00635 465 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 DSCR3O14972 297 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 SGPL1O95470 568 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 CYP3A4P08684 503 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM90A15PP0C7V4 464 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM90A14PP0C7W9 464 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 CDK4P11802 303 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 NDUFS1P28331 727 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 AKT1P31749 480 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 SLC8A1P32418 973 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 THBS4P35443 961 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 AGTR2P50052 363 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 RBM6P78332 1123 aaKnown RBP4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 HSF1Q00613 529 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 SRSF4Q08170 494 aaKnown RBP4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 GRAMD1BQ3KR37 738 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 AWAT1Q58HT5 328 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 CEP78Q5JTW2 689 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 COLEC12Q5KU26 742 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 ANO7Q6IWH7 933 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 MIS18BP1Q6P0N0 1132 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 C16orf89Q6UX73 402 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 ZNF66Q6ZN08 573 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 RAB11FIP2Q7L804 512 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 UBE2Q1Q7Z7E8 422 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 OSR1Q8TAX0 266 aaPredicted RBP4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 STT3BQ8TCJ2 826 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 BCAS4Q8TDM0 211 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 ASB12Q8WXK4 309 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 FAM118BQ9BPY3 351 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 PAGR1Q9BTK6 254 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 EFHD1Q9BUP0 239 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 MAGEH1Q9H213 219 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 PABPC3Q9H361 631 aaKnown RBP4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 CCDC134Q9H6E4 229 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 ARL8BQ9NVJ2 186 aa4.74□□□□□ -1.65
DEPDC4-205ENST00000548313 CYP2D7A0A087X1C5 515 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 CGB1A6NKQ9 187 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 PRYO14603 147 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 ENO1P06733 434 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 CHKAP35790 457 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 GRK6P43250 576 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 TRAPPC10P48553 1259 aa4.73□□□□□ -1.65
DEPDC4-205ENST00000548313 VPS41P49754 854 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms