RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CA14Q9ULX7 337 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 TBX20Q9UMR3 447 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 PLEKHM1Q9Y4G2 1056 aa4.74□□□□□ -1.65
SCAF11-210ENST00000547654 A0A087WWL8 130 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 LINC00473A8K010 186 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 GCOM1H8Y6P7 765 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 DCLK1O15075 740 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 NPTX2P47972 431 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 BCAT1P54687 386 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 UCP3P55916 312 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 FPGSQ05932 587 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 NSUN2Q08J23 767 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 EIF2B5Q13144 721 aaKnown RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 ANKRD1Q15327 319 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 MRNIPQ6NTE8 343 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 RAB11FIP2Q7L804 512 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 CCDC28AQ8IWP9 274 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 ZMIZ2Q8NF64 920 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 DDX17Q92841 729 aaKnown RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 ZBTB9Q96C00 473 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 SDCCAG3Q96C92 435 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 TRAPPC9Q96Q05 1148 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 TRIB1Q96RU8 372 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 HAPLN3Q96S86 360 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 DDX23Q9BUQ8 820 aaKnown RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 AGXT2Q9BYV1 514 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 NOD2Q9HC29 1040 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 HAUS2Q9NVX0 235 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 TMEM160Q9NX00 188 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 ZSCAN32Q9NX65 697 aa4.73□□□□□ -1.65
SCAF11-210ENST00000547654 RGS17Q9UGC6 210 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 ZMYND8Q9ULU4 1186 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 RRP7AQ9Y3A4 280 aaKnown RBP4.73□□□□□ -1.65
SCAF11-210ENST00000547654 KIF13AQ9H1H9 1805 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 A0A087WZ62 844 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 LOC102723971A0A1B0GUV8 181 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 PI4KAP2A4QPH2 592 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ZNF785A8K8V0 405 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 H0Y3Z8 333 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 AHCYL1O43865 530 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 USO1O60763 962 aaKnown RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 STARD3NLO95772 234 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 CHEK2O96017 543 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TPH1P17752 444 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ALOX12P18054 663 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 AKT1P31749 480 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 STAT1P42224 750 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 POLD2P49005 469 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 CPT1AP50416 773 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 CCR5P51681 352 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 PSMC1P62191 440 aaKnown RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ZNF844Q08AG5 666 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ERV3-1Q14264 604 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TSTQ16762 297 aaKnown RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 SLC5A9Q2M3M2 681 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TRIM71Q2Q1W2 868 aaKnown RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 AMOTQ4VCS5 1084 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TMTC4Q5T4D3 741 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 FAXCQ5TGI0 409 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ATG16L1Q676U5 607 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ZNF626Q68DY1 528 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ACAD10Q6JQN1 1059 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 B4GALNT4Q76KP1 1039 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 NRSN1Q8IZ57 195 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 PSD4Q8NDX1 1056 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 RAPGEF4Q8WZA2 1011 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 C3orf49Q96BT1 292 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TWNKQ96RR1 684 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TINAGL1Q9GZM7 467 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 SIK2Q9H0K1 926 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 TP63Q9H3D4 680 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-210ENST00000547654 NRIP3Q9NQ35 241 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 PI4KBQ9UBF8 816 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 VPS28Q9UK41 221 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 ST3GAL5Q9UNP4 418 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 AOX1Q06278 1338 aa4.72□□□□□ -1.65
SCAF11-210ENST00000547654 SPATA31D1Q6ZQQ2 1576 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TSPY2A6NKD2 308 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 M0QYG6 137 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 KCNQ3O43525 872 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 COQ9O75208 318 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TMEM63AO94886 807 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 KIF20AO95235 890 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 PRKCBP05771 671 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 PRR35P0CG20 571 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TSPY3P0CV98 308 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TSPY8P0CW00 308 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 XRCC6P12956 609 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 PECAM1P16284 738 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 GALNSP34059 522 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 CCR9P51686 369 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 ZNF135P52742 658 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 PNLIPRP1P54315 467 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TUBA4AP68366 448 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TSPY1Q01534 308 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 SATB1Q01826 763 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms