RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 TEKT4Q8WW24 435 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 HLA-CQ95604 372 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 HES6Q96HZ4 224 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 WDR24Q96S15 920 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 SLITRK6Q9H5Y7 841 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 WDCPQ9H6R7 721 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 C11orf16Q9NQ32 467 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 GKN1Q9NS71 199 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 SMPD4Q9NXE4 827 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 PCSK1NQ9UHG2 260 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 CDH7Q9ULB5 785 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 HCN4Q9Y3Q4 1203 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 JRKLQ9Y4A0 524 aa16.92■□□□□ 0.3
PPP1CA-211ENST00000546202 KIF26AQ9ULI4 1882 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 I6L893 689 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 PSTPIP1O43586 416 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 KRT7P08729 469 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 TCF3P15923 654 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 SSR1P43307 286 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 BOLA3Q53S33 107 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 NUGGCQ68CJ6 796 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 TXNRD3NBQ6F5E7 133 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 PSTKQ8IV42 348 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 UNC45BQ8IWX7 931 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 CCDC185Q8N715 623 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 ZSCAN18Q8TBC5 510 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 USP13Q92995 863 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 RNF34Q969K3 372 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 SNRNP25Q9BV90 132 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 TLR10Q9BXR5 811 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 TKTL2Q9H0I9 626 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 ANLNQ9NQW6 1124 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 TDP1Q9NUW8 608 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 FZD10Q9ULW2 581 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
PPP1CA-211ENST00000546202 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 DDX3YO15523 660 aaKnown RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 MBTPS2O43462 519 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 GREM1O60565 184 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 PRAMEF12O95522 483 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 APOEP02649 317 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 HMBSP08397 361 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 RARAP10276 462 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 PEX5P50542 639 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 MTA1Q13330 715 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ARL13BQ3SXY8 428 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ERMARDQ5T6L9 678 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 DDX42Q86XP3 938 aaKnown RBP eCLIP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ARID3BQ8IVW6 561 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 KRT35Q92764 455 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 WBP2Q969T9 261 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 AZIN2Q96A70 460 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 C16orf45Q96MC5 204 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 HAPLN3Q96S86 360 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 MYADMQ96S97 322 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 SMG9Q9H0W8 520 aaKnown RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ZWILCHQ9H900 591 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 KIF9Q9HAQ2 790 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 TRPV4Q9HBA0 871 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 PACSIN2Q9UNF0 486 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 CCL26Q9Y258 94 aa16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 ZFP37Q9Y6Q3 630 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-211ENST00000546202 FAM86C2PA6NEL3 165 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 LEFTY2O00292 366 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 FANCGO15287 622 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 LATS1O95835 1130 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 KLKB1P03952 638 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 TUBB4AP04350 444 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 MARCKSL1P49006 195 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 USP4Q13107 963 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 ATP13A4Q4VNC1 1196 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 FAM78AQ5JUQ0 283 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 KATNAL2Q8IYT4 538 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 ATP6V0D2Q8N8Y2 350 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 SH3RF2Q8TEC5 729 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 ALG3Q92685 438 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 SMARCD2Q92925 531 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 BTN2A3PQ96KV6 586 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 DCLK3Q9C098 648 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 TMPRSS4Q9NRS4 437 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 DDX56Q9NY93 547 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 CFAP97Q9P2B7 532 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 SLC12A6Q9UHW9 1150 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 AP4E1Q9UPM8 1137 aa16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.89■□□□□ 0.29
PPP1CA-211ENST00000546202 DOCK4Q8N1I0 1966 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 E2F8A0AVK6 867 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 KIF2AO00139 706 aaPredicted RBP16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 GPR37L1O60883 481 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 PAGE1O75459 146 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 IRF1P10914 325 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 TNNT1P13805 278 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 CORO1AP31146 461 aaKnown RBP16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 GJC1P36383 396 aa16.88■□□□□ 0.29
PPP1CA-211ENST00000546202 HARS2P49590 506 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms