RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CREBZFQ9NS37 354 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ASTN1O14525 1302 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 CFAP73A6NFT4 308 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 CCT8L1PA6NM43 557 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 FAM47E-STBD1D6RA91 191 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TREHO43280 583 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SHOX2O60902 331 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 LYPLA2O95372 231 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 RBP3P10745 1247 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TKTL1P51854 596 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 DLG4P78352 724 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TP53BP2Q13625 1128 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 USP10Q14694 798 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 EEF1DP3Q658K8 133 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SV2AQ7L0J3 742 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 CHMP1BQ7LBR1 199 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SERPINI1Q99574 410 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 DMGDHQ9UI17 866 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SLC45A1Q9Y2W3 748 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TGFB1I1O43294 461 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 EDIL3O43854 480 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 RHOBTB1O94844 696 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 AMD1P17707 334 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ARHGAP1Q07960 439 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TTMPQ5BVD1 217 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SYCP2LQ5T4T6 812 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 CTU1Q7Z7A3 348 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 DNAAF5Q86Y56 855 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 IFNLR1Q8IU57 520 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 JADE3Q92613 823 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 ATP13A1Q9HD20 1204 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 DMAP1Q9NPF5 467 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 METTL5Q9NRN9 209 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 SPG21Q9NZD8 308 aa8.85□□□□□ -0.99
CLIP1-218ENST00000545889 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 APOBEC2Q9Y235 224 aaKnown RBP8.85□□□□□ -0.99
CLIP1-218ENST00000545889 TRAV19A0A0A6YYK7 116 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 KRT87PA6NCN2 255 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 RASA4BC9J798 803 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 UBXN8O00124 270 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ACKR2O00590 384 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 RASA4O43374 803 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 PARNO95453 639 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ASGR1P07306 291 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TNNI3P19429 210 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 PON1P27169 355 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CCR1P32246 355 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 KRT20P35900 424 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TBX4P57082 545 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 MRPS6P82932 125 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CUL2Q13617 745 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ZC3H12BQ5HYM0 836 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 AARS2Q5JTZ9 985 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ZNF697Q5TEC3 545 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 PPP2R2DQ66LE6 453 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 LRRC55Q6ZSA7 311 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ZNF614Q8N883 585 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 PDCD7Q8N8D1 485 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 C1orf131Q8NDD1 294 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 SLC35C1Q96A29 364 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 NDNQ99608 321 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ELOVL4Q9GZR5 314 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CHORDC1Q9UHD1 332 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 MAFBQ9Y5Q3 323 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CACNA1GO43497 2377 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ANKRD33BA6NCL7 494 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 P4HA2O15460 535 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 INHAP05111 366 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CD52P31358 61 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TRIM32Q13049 653 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 PTK6Q13882 451 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 KCNA10Q16322 511 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 KLHDC7AQ5VTJ3 777 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 FAM131BQ86XD5 332 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 DAW1Q8N136 415 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 LRRC37BQ96QE4 947 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ERGIC2Q96RQ1 377 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 SIKE1Q9BRV8 207 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TRIM55Q9BYV6 548 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 CARD9Q9H257 536 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ETNK1Q9HBU6 452 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 PREBQ9HCU5 417 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 VPS51Q9UID3 782 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 GNRH1P01148 92 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 MMEP08473 750 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 UBTFL6P0CB48 400 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ZCCHC18P0CG32 403 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 ERFP50548 548 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 NCKAP1LP55160 1127 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 SGO1Q5FBB7 561 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 MRNIPQ6NTE8 343 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 KDM7AQ6ZMT4 941 aa8.84□□□□□ -0.99
CLIP1-218ENST00000545889 TRMT11Q7Z4G4 463 aaKnown RBP8.84□□□□□ -0.99
CLIP1-218ENST00000545889 GALNT15Q8N3T1 639 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms