RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MT-CO1P00395 513 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 LYNP07948 512 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 GRIA3P42263 894 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CDK7P50613 346 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CLEC16AQ2KHT3 1053 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 C6orf52Q5T4I8 152 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 GARNL3Q5VVW2 1013 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 ZFYVE28Q9HCC9 887 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 GPN1Q9HCN4 374 aaPredicted RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 SLC35C2Q9NQQ7 365 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 SEC31BQ9NQW1 1179 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-216ENST00000545170 GMPPBQ9Y5P6 360 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 BCLAF3A2AJT9 711 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 E7ENX8 843 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 N4BP2L1Q5TBK1 243 aaPredicted RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 PTRHD1Q6GMV3 140 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 RBM12BQ8IXT5 1001 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 TRPV1Q8NER1 839 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ERMAPQ96PL5 475 aaPredicted RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 CRISPLD1Q9H336 500 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ARMC7Q9H6L4 198 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 AS3MTQ9HBK9 375 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 TMEM260Q9NX78 707 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ENOPH1Q9UHY7 261 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 TUBE1Q9UJT0 475 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 KAT6BQ8WYB5 2073 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CPNE3O75131 537 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 C9P02748 559 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 SERPINE1P05121 402 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 PDHA2P29803 388 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 FMO5P49326 533 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ANKS6Q68DC2 871 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 SPAG16Q8N0X2 631 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 SYNPOQ8N3V7 929 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CKAP2Q8WWK9 683 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 NXNL1Q96CM4 212 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 HGH1Q9BTY7 390 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 PUS3Q9BZE2 481 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 SLC52A2Q9HAB3 445 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 PTPRHQ9HD43 1115 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 EIF3KQ9UBQ5 218 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 FAM240BA0A1B0GVZ2 78 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 KLHL33A6NCF5 533 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CHURC1-FNTBB4DL54 471 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 HMGB3O15347 200 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 UPP2O95045 317 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 SERPINA1P01009 418 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 PDGFRBP09619 1106 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 IL2RBP14784 551 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ETS1P14921 441 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 CCNFP41002 786 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 MAPK12P53778 367 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 PTPRKQ15262 1439 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ARSHQ5FYA8 562 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 RBM20Q5T481 1227 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 SLC26A11Q86WA9 606 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 ADHFE1Q8IWW8 467 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 DRAXINQ8NBI3 349 aaPredicted RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 TMC2Q8TDI7 906 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 NSUN6Q8TEA1 469 aaKnown RBP8.83□□□□□ -1
ATXN3-216ENST00000545170 AFG1LQ8WV93 481 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 GNPTGQ9UJJ9 305 aa8.83□□□□□ -1
ATXN3-216ENST00000545170 AFF2P51816 1311 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 EEF2KO00418 725 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 TCEA3O75764 348 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ZMPSTE24O75844 475 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 FADS2O95864 444 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 MAPK1P28482 360 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 HSD17B4P51659 736 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 TNK2Q07912 1038 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 UBAP2LQ14157 1087 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 Q3C1V9 767 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 INO80DQ53TQ3 878 aaPredicted RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 ULK2Q8IYT8 1036 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CCDC24Q8N4L8 307 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PCDH20Q8N6Y1 951 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 DCLK3Q9C098 648 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 RSAD1Q9HA92 442 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CLN6Q9NWW5 311 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 IKZF3Q9UKT9 509 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 SSR3Q9UNL2 185 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 AP5Z1O43299 807 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 NFICP08651 508 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CLTBP09497 229 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ALADP13716 330 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 RXRGP48443 463 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 RGS4P49798 205 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 NFX1Q12986 1120 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 DDB1Q16531 1140 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 GLRA4Q5JXX5 417 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 GJB7Q6PEY0 223 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ZCCHC23Q6ZST2 131 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 STRA8Q7Z7C7 330 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 TBC1D19Q8N5T2 526 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 C12orf50Q8NA57 414 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms