RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 ANKEF1Q9NU02 776 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 TBC1D13Q9NVG8 400 aa20.52■□□□□ 0.88
BPTF-208ENST00000544778 TMEM253P0C7T8 217 aa20.52■□□□□ 0.87
BPTF-208ENST00000544778 HPCAL1P37235 193 aa20.52■□□□□ 0.87
BPTF-208ENST00000544778 SLC13A5Q86YT5 568 aaPredicted RBP20.52■□□□□ 0.87
BPTF-208ENST00000544778 LRRC39Q96DD0 335 aa20.52■□□□□ 0.87
BPTF-208ENST00000544778 MIR1-1HGQ9H1L0 117 aa20.52■□□□□ 0.87
BPTF-208ENST00000544778 MYL12BO14950 172 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 ECDO95905 644 aaPredicted RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 RBP1P09455 135 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 GPR15P49685 360 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 SPIDRQ14159 915 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 FAM131BQ86XD5 332 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 MCOLN3Q8TDD5 553 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 POLR1BQ9H9Y6 1135 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 TIMM13Q9Y5L4 95 aaPredicted RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 ITGA3P26006 1051 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 EXOSC10Q01780 885 aaKnown RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 DET1Q7L5Y6 550 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 PCSK9Q8NBP7 692 aaKnown RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 ADGRA3Q8IWK6 1321 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 LRRC49Q8IUZ0 686 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 PIGUQ9H490 435 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 EFCAB10A6NFE3 127 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 KIF1CO43896 1103 aaKnown RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 OR56A5P0C7T3 313 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 VDRP11473 427 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 IFNGR2P38484 337 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 MAPK11Q15759 364 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 CCNI2Q6ZMN8 369 aaPredicted RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 COLGALT1Q8NBJ5 622 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 CELF6Q96J87 481 aaKnown RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 MAGEA13PA6NCF6 341 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 SLC26A4O43511 780 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 UQCRBP14927 111 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 TYMPP19971 482 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 PPM1LQ5SGD2 360 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 ARMC3Q5W041 872 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 MPZL3Q6UWV2 235 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 CDH24Q86UP0 819 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 GPRC5CQ9NQ84 441 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 ZNF112Q9UJU3 913 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
BPTF-208ENST00000544778 STK4Q13043 487 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 PTPAQ15257 358 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 NDUFA5Q16718 116 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 ENKURQ8TC29 256 aa20.51■□□□□ 0.87
BPTF-208ENST00000544778 TM9SF1O15321 606 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 RASGRP2Q7LDG7 609 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 ADSSL1Q8N142 457 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 ZSWIM2Q8NEG5 633 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 RMND5BQ96G75 393 aaPredicted RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 F9P00740 461 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 TKTL1P51854 596 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 AQP5P55064 265 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 KLHDC7AQ5VTJ3 777 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 CNGB3Q9NQW8 809 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 DDX43Q9NXZ2 648 aaKnown RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 LRRC6Q86X45 466 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 TMEM121Q9BTD3 319 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 CEP41Q9BYV8 373 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 CPA4Q9UI42 421 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 TFR2Q9UP52 801 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 SF3B1O75533 1304 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■■■■ 133.7
BPTF-208ENST00000544778 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 LOC102724159A0A0B4J2E5 919 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 ZNF839A8K0R7 811 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 WARSP23381 471 aaKnown RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 PWP2Q15269 919 aaKnown RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 USP38Q8NB14 1042 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 ZCCHC2Q9C0B9 1178 aaKnown RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 SKP1P63208 163 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 MFSD7Q6UXD7 560 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 CHPFQ8IZ52 775 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 POP1Q99575 1024 aaKnown RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 BATF3Q9NR55 127 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 CASP4P49662 377 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 FAM171BQ6P995 826 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 FAM151AQ8WW52 585 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 PROX1Q92786 737 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 FRMD8Q9BZ67 464 aaPredicted RBP20.5■□□□□ 0.87
BPTF-208ENST00000544778 LAMC1P11047 1609 aa20.5■□□□□ 0.87
BPTF-208ENST00000544778 ALOX12P18054 663 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 RENBPP51606 427 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 ZBTB49Q6ZSB9 765 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 ZNF621Q6ZSS3 439 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 TPCN2Q8NHX9 752 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 REPS1Q96D71 796 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 RIBC2Q9H4K1 309 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 O00370 1275 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 PRKAG1P54619 331 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 TMEM132CQ8N3T6 1108 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 RBM22Q9NW64 420 aaKnown RBP eCLIP20.49■□□□□ 0.872e-8■■■■■ 43.1
BPTF-208ENST00000544778 DAPK2Q9UIK4 370 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 A0A1B0GTH6 734 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms