RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 FZD6O60353 706 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PEX11AO75192 247 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 NR3C2P08235 984 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 HMBSP08397 361 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CD63P08962 238 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 OCA2Q04671 838 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SNTA1Q13424 505 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SSX2Q16385 188 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SH3RF3Q8TEJ3 882 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 P3H4Q92791 437 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PRKD2Q9BZL6 878 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MLXQ9UH92 298 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MAN2B2Q9Y2E5 1009 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 DERAQ9Y315 318 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 ASB4Q9Y574 426 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MAP3K19Q56UN5 1328 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MAP3K15Q6ZN16 1313 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 ADCY6O43306 1168 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 KRT36O76013 467 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SLC15A1P46059 708 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SLC26A5P58743 744 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CLCA4Q14CN2 919 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 DGKKQ5KSL6 1271 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 IL23RQ5VWK5 629 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SPOPLQ6IQ16 392 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MMAAQ8IVH4 418 aaKnown RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SULF1Q8IWU6 871 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 TSEN2Q8NCE0 465 aaKnown RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 OR6B3Q8NGW1 331 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 LPGAT1Q92604 370 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CHMP6Q96FZ7 201 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 IMPG2Q9BZV3 1241 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 USP21Q9UK80 565 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 APPL1Q9UKG1 709 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PCDHB12Q9Y5F1 795 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CACNG2Q9Y698 323 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 ATP8B3O60423 1300 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 MBP02144 154 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CLEC2LP0C7M8 214 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ANPEPP15144 967 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CD46P15529 392 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 GJA1P17302 382 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ITGB6P18564 788 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ACADVLP49748 655 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 SCAND1P57086 179 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CAPRIN1Q14444 709 aaKnown RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 PTPAQ15257 358 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 NT5DC1Q5TFE4 455 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 SLC30A6Q6NXT4 461 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 FAM196AQ6ZSG2 479 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 KIF18BQ86Y91 864 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 FOXP4Q8IVH2 680 aaPredicted RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 DIS3L2Q8IYB7 885 aaKnown RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 NDST4Q9H3R1 872 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 SETD4Q9NVD3 440 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ARMC1Q9NVT9 282 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 VSX1Q9NZR4 365 aaPredicted RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ADAMTS1Q9UHI8 967 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 GTF2IRD1Q9UHL9 959 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 GINS2Q9Y248 185 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 FLT1P17948 1338 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CARMIL3Q8ND23 1372 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 PGRMC1O00264 195 aaKnown RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CRTAPO75718 401 aaPredicted RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ALBP02768 609 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CASP4P49662 377 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 SLC9A5Q14940 896 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 MMGT1Q8N4V1 131 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 RAB3IL1Q8TBN0 382 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 UBLCP1Q8WVY7 318 aaPredicted RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 RSC1A1Q92681 617 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 KLHL29Q96CT2 875 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 TMEM79Q9BSE2 394 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ACTR6Q9GZN1 396 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 MROH8Q9H579 483 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ASIC3Q9UHC3 531 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 POU2F3Q9UKI9 436 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ARL2BPQ9Y2Y0 163 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 FUOMA2VDF0 154 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 SCAMP1O15126 338 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 RGS20O76081 388 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 NQO1P15559 274 aaKnown RBP9.13□□□□□ -0.95
VPS13D-212ENST00000543766 PFKFB1P16118 471 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ATP6V1C1P21283 382 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 CCR1P32246 355 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 GMFBP60983 142 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 KCNAB2Q13303 367 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 NNTQ13423 1086 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 LLGL1Q15334 1064 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 SURF1Q15526 300 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 GRIK5Q16478 980 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 KRBOX4Q5JUW0 171 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ADGRF1Q5T601 910 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 IQCKQ8N0W5 287 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 KIF2BQ8N4N8 673 aa9.13□□□□□ -0.95
VPS13D-212ENST00000543766 ANKRD52Q8NB46 1076 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms