RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CHCHD4Q8N4Q1 142 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 TP53I13Q8NBR0 393 aaPredicted RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 SUN3Q8TAQ9 357 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 POC1BQ8TC44 478 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 KIF1BPQ96EK5 621 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ZBTB45Q96K62 511 aaPredicted RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PHACTR3Q96KR7 559 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 SPATA17Q96L03 361 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PPP1R10Q96QC0 940 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PIGSQ96S52 555 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 TCF25Q9BQ70 676 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 SPATA25Q9BR10 227 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PAAF1Q9BRP4 392 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ADPGKQ9BRR6 497 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PTDSS2Q9BVG9 487 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 RANBP17Q9H2T7 1088 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 SMOC2Q9H3U7 446 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 SERHL2Q9H4I8 314 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ERVK-5Q9HDB9 667 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PPP1R14DQ9NXH3 145 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF112Q9UJU3 913 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 ADAM29Q9UKF5 820 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 NDRG4Q9ULP0 352 aaKnown RBP4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 NR2E1Q9Y466 385 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 LYVE1Q9Y5Y7 322 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 PMF1-BGLAPU3KQ54 211 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 CUL7Q14999 1698 aa4.28□□□□□ -1.72
SFSWAP-211ENST00000542813 COL15A1P39059 1388 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 KDM3AQ9Y4C1 1321 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ARAP3Q8WWN8 1544 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 GXYLT2A0PJZ3 443 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ADM5C9JUS6 153 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 TUBB4AP04350 444 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SPATA31D3P0C874 917 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ITGALP20701 1170 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 DRD1P21728 446 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 EPHA3P29320 983 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 PPIFP30405 207 aaKnown RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 UQCRC1P31930 480 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 THBS4P35443 961 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 BSGP35613 385 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 PSMB10P40306 273 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 PNPLA4P41247 253 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 GPD2P43304 727 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 GSTM5P46439 218 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM3BP58499 235 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 TIAL1Q01085 375 aaKnown RBP eCLIP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 PLP2Q04941 152 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 STK4Q13043 487 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 RIN1Q13671 783 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 E2F2Q14209 437 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 TMEM266Q2M3C6 531 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ARHGAP40Q5TG30 622 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 RGS7BPQ6MZT1 257 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SPATA31D4Q6ZUB0 917 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 GPRIN1Q7Z2K8 1008 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 KRT27Q7Z3Y8 459 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 KDELC2Q7Z4H8 507 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 GALNTL5Q7Z4T8 443 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 RALYLQ86SE5 291 aaKnown RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM83AQ86UY5 434 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ZSCAN30Q86W11 494 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 CNPY4Q8N129 248 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 CNTROBQ8N137 903 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 C17orf53Q8N3J3 647 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 KLHL36Q8N4N3 616 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ZNF713Q8N859 430 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 PTGR2Q8N8N7 351 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ELP4Q96EB1 424 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 MARS2Q96GW9 593 aaKnown RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 LRIG1Q96JA1 1093 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 LENG8Q96PV6 779 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 EIF3CQ99613 913 aaKnown RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 FTOQ9C0B1 505 aaKnown RBP eCLIP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SIL1Q9H173 461 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 TTYH1Q9H313 450 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 MROH8Q9H579 483 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 ZWILCHQ9H900 591 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SYNPO2LQ9H987 977 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SPON1Q9HCB6 807 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 CCDC177Q9NQR7 707 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 BEX4Q9NWD9 120 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 POGKQ9P215 609 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SLC25A10Q9UBX3 287 aaPredicted RBP4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SARDHQ9UL12 918 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 RIMKLBQ9ULI2 386 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 RCE1Q9Y256 329 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 SLC27A6Q9Y2P4 619 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 PCDHB7Q9Y5E2 793 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 YEATS2Q9ULM3 1422 aa4.27□□□□□ -1.73
SFSWAP-211ENST00000542813 BCORL1Q5H9F3 1711 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 LOC105369274A0A096LPK9 316 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 LOC102723532A0A0G2JNH3 316 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 A0A1W2PRX2 142 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms