RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FOXR2Q6PJQ5 311 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM67Q6ZTA4 783 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 KATNAL2Q8IYT4 538 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 CFAP61Q8NHU2 1237 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 CNOT10Q9H9A5 744 aaKnown RBP10.46□□□□□ -0.74
TOP3A-208ENST00000542570 ACSS2Q9NR19 701 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 DSEQ9UL01 958 aa10.46□□□□□ -0.74
TOP3A-208ENST00000542570 hCG_1818297A0A087WSY0 165 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 A6NNZ2 444 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 E5RI56 91 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 ITGBL1O95965 494 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 HOXA11P31270 313 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 NNMTP40261 264 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 RPL10AP62906 217 aaKnown RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 ZNF844Q08AG5 666 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 DPYSL3Q14195 570 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 TUBB8Q3ZCM7 444 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 ATP6V0D2Q8N8Y2 350 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 OR52K1Q8NGK4 314 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 STMN2Q93045 179 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 CHMP6Q96FZ7 201 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 NRDE2Q9H7Z3 1164 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 IARS2Q9NSE4 1012 aaKnown RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 UTP6Q9NYH9 597 aaKnown RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 LIASO43766 372 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 STBD1O95210 358 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 ATXN3P54252 364 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 PKN2Q16513 984 aaKnown RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 DCAF12L1Q5VU92 463 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 OSTM1Q86WC4 334 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 GLIS1Q8NBF1 620 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 ELMO2Q96JJ3 720 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 FCRL2Q96LA5 508 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 PAFAH2Q99487 392 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 TLR8Q9NR97 1041 aaKnown RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 NINJ2Q9NZG7 142 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 NCANO14594 1321 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 RIPK2O43353 540 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 TLR5O60602 858 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 CYBBP04839 570 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 POLBP06746 335 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 ITGB6P18564 788 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 HDCP19113 662 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 COPS2P61201 443 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 DCLRE1AQ6PJP8 1040 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 AENQ8WTP8 325 aaKnown RBP10.45□□□□□ -0.74
TOP3A-208ENST00000542570 HSFY1Q96LI6 401 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 CYP4F12Q9HCS2 524 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 GMIPQ9P107 970 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 CDH9Q9ULB4 789 aa10.45□□□□□ -0.74
TOP3A-208ENST00000542570 APOC4-APOC2K7ER74 178 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 FBXO21O94952 628 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 APOC2P02655 101 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 ERVK-10P10266 1014 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 MATKP42679 507 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 GRIK3Q13003 919 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 MMEL1Q495T6 779 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 ZRANB3Q5FWF4 1079 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 PLPP4Q5VZY2 271 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 GPR63Q9BZJ6 419 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 TASP1Q9H6P5 420 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 PCDH18Q9HCL0 1135 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 PSMC3IPQ9P2W1 217 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 COL1A2P08123 1366 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 SF3B1O75533 1304 aaKnown RBP eCLIP10.44□□□□□ -0.745e-6■■■■■ 131.4
TOP3A-208ENST00000542570 CCDC85CA6NKD9 419 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 EIF4E1BA6NMX2 242 aaKnown RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 CCL22O00626 93 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 DNALI1O14645 258 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 VAPBO95292 243 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 LCA5LO95447 670 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 PYGBP11216 843 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 CKBP12277 381 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 HSPA9P38646 679 aaKnown RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 CPA2P48052 419 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 SLC5A3P53794 718 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 NAT16Q8N8M0 369 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 MAB21L3Q8N8X9 362 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 XPO6Q96QU8 1125 aaKnown RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 GPR88Q9GZN0 384 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 XYLT2Q9H1B5 865 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 KCND1Q9NSA2 647 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 DONSONQ9NYP3 566 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 LMCD1Q9NZU5 365 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 LOC100653049A0A140TA62 436 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 TTC24A2A3L6 582 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 NCF1BA6NI72 391 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 NCF1CA8MVU1 366 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 RAMP2O60895 175 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 KRT34O76011 436 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 BEST1O76090 585 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 CYP1A1P04798 512 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 NCF1P14598 390 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-208ENST00000542570 PAMP19021 973 aa10.44□□□□□ -0.74
TOP3A-208ENST00000542570 APLP1P51693 650 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms