RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TEX35Q5T0J7 233 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 CES5AQ6NT32 575 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 RFX8Q6ZV50 586 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 MTERF4Q7Z6M4 381 aaKnown RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 SCD5Q86SK9 330 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 BBS5Q8N3I7 341 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 RSAD2Q8WXG1 361 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 NKD2Q969F2 451 aaPredicted RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
VTN-202ENST00000539746 FAF2Q96CS3 445 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 RNF157Q96PX1 679 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 VAT1Q99536 393 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 FOXP3Q9BZS1 431 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 NKX2-4Q9H2Z4 354 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 ACBD3Q9H3P7 528 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 GOLPH3Q9H4A6 298 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 COX16Q9P0S2 106 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 TBC1D14Q9P2M4 693 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 PATJQ8NI35 1801 aa12.2□□□□□ -0.46
VTN-202ENST00000539746 GRM6O15303 877 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 ADAM12O43184 909 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 GABBR2O75899 941 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 NEBLO76041 1014 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 PAPLNO95428 1278 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 GJB6O95452 261 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 SEC24AO95486 1093 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 FYNP06241 537 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 CKMP06732 381 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 MBL2P11226 248 aaPredicted RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 HMGA1P17096 107 aaKnown RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 HDCP19113 662 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 EPHB2P29323 1055 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 WEE1P30291 646 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 MAPKAPK2P49137 400 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 DRG2P55039 364 aaKnown RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 ERVFC1P60507 584 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 SLC7A9P82251 487 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 SARNPP82979 210 aaKnown RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 BRD3Q15059 726 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 ANO4Q32M45 955 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 PREPLQ4J6C6 727 aaPredicted RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 KCNT1Q5JUK3 1230 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 SYPL2Q5VXT5 272 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 SLC9A4Q6AI14 798 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 LLGL2Q6P1M3 1020 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 MFSD7Q6UXD7 560 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 ZNF783Q6ZMS7 281 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 BHLHA9Q7RTU4 235 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 METTL3Q86U44 580 aaKnown RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 MIB1Q86YT6 1006 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 PIWIL1Q96J94 861 aaKnown RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
VTN-202ENST00000539746 ZNF148Q9UQR1 794 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 SH3BP1Q9Y3L3 701 aa12.19□□□□□ -0.46
VTN-202ENST00000539746 CXorf51AA0A1B0GTR3 108 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 ZNF185O15231 689 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 CREB3O43889 395 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 OAS1P00973 400 aaKnown RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 GABRR2P28476 465 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 COILP38432 576 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 VCPP55072 806 aaKnown RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 MLLT6P55198 1093 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 GEMIN4P57678 1058 aaKnown RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 MLLT1Q03111 559 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 ZNF211Q13398 564 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 CCDC142Q17RM4 750 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 C6orf118Q5T5N4 469 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 KAZNQ674X7 775 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 TMEM184AQ6ZMB5 413 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 PPP1R21Q6ZMI0 780 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 SLC22A17Q8WUG5 538 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 AUTS2Q8WXX7 1259 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 RAPGEF5Q92565 580 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 SLC39A13Q96H72 371 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 RIPOR3Q96MK2 946 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 NECTIN4Q96NY8 510 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 CSPG4P5Q96PW8 444 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 KRT12Q99456 494 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 ZYG11BQ9C0D3 744 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 TASP1Q9H6P5 420 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 WDR6Q9NNW5 1121 aaKnown RBP12.18□□□□□ -0.46
VTN-202ENST00000539746 GDE1Q9NZC3 331 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
VTN-202ENST00000539746 PTPRDP23468 1912 aa12.17□□□□□ -0.46
VTN-202ENST00000539746 UQCRHLA0A096LP55 91 aa12.17□□□□□ -0.46
VTN-202ENST00000539746 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
VTN-202ENST00000539746 CCDC151A5D8V7 595 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms