RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 LAMA2P24043 3122 aaKnown RBP15.04■□□□□ -0
CDCA3-207ENST00000538862 PIK3R2O00459 728 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 KRT38O76015 456 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 APOEP02649 317 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 MYL3P08590 195 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 ZFXP17010 805 aaPredicted RBP15.04■□□□□ -0
CDCA3-207ENST00000538862 GM2AP17900 193 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 MAGEA3P43357 314 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 MAGEA10P43363 369 aaPredicted RBP15.04■□□□□ -0
CDCA3-207ENST00000538862 ARHGAP1Q07960 439 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 PPP1R26Q5T8A7 1209 aaPredicted RBP15.04■□□□□ -0
CDCA3-207ENST00000538862 PMF1Q6P1K2 205 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 SESTD1Q86VW0 696 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 CTAGE3PQ8IX95 158 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 C12orf29Q8N999 325 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 SLC35F5Q8WV83 523 aa15.04■□□□□ -0
CDCA3-207ENST00000538862 KHSRPQ92945 711 aaKnown RBP eCLIP15.04■□□□□ -0
CDCA3-207ENST00000538862 DENND2DQ9H6A0 471 aaPredicted RBP15.04■□□□□ -0
CDCA3-207ENST00000538862 SZT2Q5T011 3432 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 GCATO75600 419 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 LGALS2P05162 132 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 APRTP07741 180 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 TPSB2P20231 275 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 GRM5P41594 1212 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 NR2C2P49116 596 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 RGS7P49802 495 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 ZBTB16Q05516 673 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 CDK18Q07002 472 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 NAA25Q14CX7 972 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 TPSAB1Q15661 275 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 C1orf53Q5VUE5 145 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 ATG16L1Q676U5 607 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 TTC30AQ86WT1 665 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.03■□□□□ -0
CDCA3-207ENST00000538862 RAB3IL1Q8TBN0 382 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 C7orf26Q96N11 449 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 MIPEPQ99797 713 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 CADM1Q9BY67 442 aaKnown RBP15.03■□□□□ -0
CDCA3-207ENST00000538862 NRDE2Q9H7Z3 1164 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 DCLRE1BQ9H816 532 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 PLAC1Q9HBJ0 212 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 GPATCH2LQ9NWQ4 482 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 DERAQ9Y315 318 aa15.03■□□□□ -0
CDCA3-207ENST00000538862 LTBP2Q14767 1821 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 TRIM43BA6NCK2 446 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 CXorf49A8MYA2 514 aaPredicted RBP15.02■□□□□ -0
CDCA3-207ENST00000538862 I3L4J1 428 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 TSPAN1O60635 241 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 RFPL1O75677 317 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 LUC7L3O95232 432 aaKnown RBP15.02■□□□□ -0
CDCA3-207ENST00000538862 SERPINB3P29508 390 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 PTPN9P43378 593 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 CMPK2Q5EBM0 449 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 HABP4Q5JVS0 413 aaKnown RBP15.02■□□□□ -0
CDCA3-207ENST00000538862 SYCP2LQ5T4T6 812 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 C4orf50Q6ZRC1 276 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 EP400NLQ6ZTU2 488 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 CYS1Q717R9 158 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 BZW1Q7L1Q6 419 aaKnown RBP15.02■□□□□ -0
CDCA3-207ENST00000538862 ARCQ7LC44 396 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 VPS52Q8N1B4 723 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 TRIM43Q96BQ3 446 aaPredicted RBP15.02■□□□□ -0
CDCA3-207ENST00000538862 KIF12Q96FN5 646 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 ARL8BQ9NVJ2 186 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 KCNK4Q9NYG8 393 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 HESX1Q9UBX0 185 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 PRKAG2Q9UGJ0 569 aa15.02■□□□□ -0
CDCA3-207ENST00000538862 LIN7AO14910 233 aaPredicted RBP15.02□□□□□ -0.01
CDCA3-207ENST00000538862 GSC2O15499 205 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 VTNP04004 478 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 MYL2P10916 166 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 CYP2F1P24903 491 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 CPT1AP50416 773 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 SERPINB9P50453 376 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 HDAC4P56524 1084 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 PURAQ00577 322 aaKnown RBP15.02□□□□□ -0.01
CDCA3-207ENST00000538862 DPYSL2Q16555 572 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 CA9Q16790 459 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 UNC5AQ6ZN44 842 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.02□□□□□ -0.01
CDCA3-207ENST00000538862 GSDMBQ8TAX9 411 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 CCDC110Q8TBZ0 833 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 OXNAD1Q96HP4 312 aaPredicted RBP15.02□□□□□ -0.01
CDCA3-207ENST00000538862 NAF1Q96HR8 494 aaKnown RBP15.02□□□□□ -0.01
CDCA3-207ENST00000538862 SIGLEC10Q96LC7 697 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 EBNA1BP2Q99848 306 aaKnown RBP15.02□□□□□ -0.01
CDCA3-207ENST00000538862 GDF15Q99988 308 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 PRO3102Q9H379 93 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 PLEKHA5Q9HAU0 1116 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 GTF2IRD1Q9UHL9 959 aa15.02□□□□□ -0.01
CDCA3-207ENST00000538862 FAM159BA6NKW6 160 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 ARVCFO00192 962 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 PAPSS1O43252 624 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 CLTBP09497 229 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 ITGB8P26012 769 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 L1CAMP32004 1257 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 SCNN1AP37088 669 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 CDK7P50613 346 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 TAF11Q15544 211 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 DCAF4L1Q3SXM0 396 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms