RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CKAP5Q14008 2032 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 GIPC1O14908 333 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 GJB6O95452 261 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 GNA14O95837 355 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 MOCS2O96007 188 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 MAOBP27338 520 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 GNA15P30679 374 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 NTSR1P30989 418 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 MPLP40238 635 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 P2RY2P41231 377 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 PPP1R2P41236 205 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 YWHAEP62258 255 aaKnown RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 COG7P83436 770 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 PDCLQ13371 301 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 ZNF234Q14588 700 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 CSRP2Q16527 193 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 EXOC3L4Q17RC7 722 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 ZC3H12AQ5D1E8 599 aaKnown RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 TAF3Q5VWG9 929 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 PMS2CLQ68D20 193 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 GBP6Q6ZN66 633 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 FAM183BPQ6ZVS7 135 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 ADIPOR2Q86V24 386 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 SLC41A1Q8IVJ1 513 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 CHPFQ8IZ52 775 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 OR52K2Q8NGK3 314 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 IPO4Q8TEX9 1081 aaKnown RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 DDI1Q8WTU0 396 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 SLC20A1Q8WUM9 679 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 ACDQ96AP0 544 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 SLC39A13Q96H72 371 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 NAA15Q9BXJ9 866 aaKnown RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 VPS16Q9H269 839 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 NDST4Q9H3R1 872 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 THAP9Q9H5L6 903 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 STIM2Q9P246 746 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 WDR35Q9P2L0 1181 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 RAB23Q9ULC3 237 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 KIAA1257Q9ULG3 409 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 STON1Q9Y6Q2 735 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 ASCC3Q8N3C0 2202 aaKnown RBP10.04□□□□□ -0.8
SSBP3-215ENST00000533946 CACNA1EQ15878 2313 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 KNL1Q8NG31 2342 aa10.04□□□□□ -0.8
SSBP3-215ENST00000533946 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 SYNJ2BP-COX16A0A087WUM0 186 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 CCDC163A0A0D9SF12 145 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 TM4SF5O14894 197 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 TBL1XO60907 577 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 NCAM1P13591 858 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 ITPKAP23677 461 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 CNR2P34972 360 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 ANP32AP39687 249 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 DHPSP49366 369 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 IRX4P78413 519 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 EIF4EBP2Q13542 120 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 KCNJ12Q14500 433 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 DRAP1Q14919 205 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 MAN2A1Q16706 1144 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 PTPRNQ16849 979 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 FUT11Q495W5 492 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 TCP11X2Q5H9J9 407 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 PIK3R6Q5UE93 754 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 KLHDC7AQ5VTJ3 777 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 RBM43Q6ZSC3 357 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 APTXQ7Z2E3 356 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 C14orf80Q86SX3 495 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 TMEM110Q86TL2 294 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 NOP9Q86U38 636 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 PGBD3Q8N328 593 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 DDX1Q92499 740 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 FAM149B1Q96BN6 582 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 MYO19Q96H55 970 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 MRGPRX1Q96LB2 322 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 HSFY1Q96LI6 401 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 GABRG3Q99928 467 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 LSM14BQ9BX40 385 aaKnown RBP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 GANQ9H2C0 597 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 ABCB8Q9NUT2 735 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 FANCLQ9NW38 375 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 BCCIPQ9P287 314 aaKnown RBP eCLIP10.03□□□□□ -0.8
SSBP3-215ENST00000533946 CYP8B1Q9UNU6 501 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 NFE2L3Q9Y4A8 694 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 DOCK9Q9BZ29 2069 aa10.03□□□□□ -0.8
SSBP3-215ENST00000533946 IGHV1OR15-9A0A0B4J2B8 117 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-215ENST00000533946 RNF103O00237 685 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 ACSL4O60488 711 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 ZNF806P0C7X5 589 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 CHRNB2P17787 502 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms