RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 HNRNPLLQ8WVV9 542 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 TEKT4Q8WW24 435 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SAMD11Q96NU1 681 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 LRRC1Q9BTT6 524 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 GPR88Q9GZN0 384 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 RBM22Q9NW64 420 aaKnown RBP eCLIP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 TSC22D4Q9Y3Q8 395 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SDR42E2A6NKP2 422 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 TIMM44O43615 452 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 APOA1P02647 267 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.562e-17■■■□□ 18.2
AMBRA1-211ENST00000533727 OR1D2P34982 312 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 PGM1P36871 562 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 COILP38432 576 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 FUT2Q10981 343 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ITGA9Q13797 1035 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 KCNK18Q7Z418 384 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM9CQ8IZT9 166 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 CATSPER1Q8NEC5 780 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SYTL2Q9HCH5 934 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 NT5MQ9NPB1 228 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ADAM28Q9UKQ2 775 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF839A8K0R7 811 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 CCDC22O60826 627 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM107AO95990 144 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 RARGP13631 454 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 TYMPP19971 482 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SERPINB4P48594 390 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 TRPC1P48995 793 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 KLK7P49862 253 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ARHGDIAP52565 204 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 AIF1P55008 147 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 IRF5Q13568 498 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 MON1AQ86VX9 555 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 TNS4Q8IZW8 715 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 RIC8BQ9NVN3 520 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 RNF186Q9NXI6 227 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM47DPA6NHR8 397 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SUPT3HO75486 399 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 DAB1O75553 588 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SRP72O76094 671 aaKnown RBP11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 CCNE2O96020 404 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 JCHAINP01591 159 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SERPIND1P05546 499 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 KRT16P08779 473 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SPATA31C1P0DKV0 1188 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 CES1P23141 567 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 HP1BP3Q5SSJ5 553 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 LLGL2Q6P1M3 1020 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 PHACTR4Q8IZ21 702 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 MYO1HQ8N1T3 1032 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 CCDC126Q96EE4 140 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 FAXDC2Q96IV6 333 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 PRPF18Q99633 342 aaKnown RBP11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 NID2Q14112 1375 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 TCP11X1B4DZS4 312 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ZBTB39O15060 712 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ARL2P36404 184 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SCNN1BP51168 640 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 FBXW4P57775 412 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 SKP1P63208 163 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 MTF1Q14872 753 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 NFIL3Q16649 462 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ZACNQ401N2 412 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 IRAK1BP1Q5VVH5 260 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 LRIG3Q6UXM1 1119 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 USP45Q70EL2 814 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 DDIASQ8IXT1 998 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 OMDQ99983 421 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 DLGAP2Q9P1A6 1054 aa11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 ZMYND8Q9ULU4 1186 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-211ENST00000533727 A0A0B4J269 797 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 TSPAN3O60637 253 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 AGTP01019 485 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CCDC130P13994 396 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 KRT4P19013 534 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 HALP42357 657 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 C9orf57Q5W0N0 161 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 FBXL19Q6PCT2 694 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 TRPM8Q7Z2W7 1104 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 BRD9Q9H8M2 597 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 STX18Q9P2W9 335 aaKnown RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 GTF2IRD1Q9UHL9 959 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 HES2Q9Y543 173 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CCDC78A2IDD5 438 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CCDC159P0C7I6 412 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 THOP1P52888 689 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CDH8P55286 799 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CAMK2GQ13555 558 aaPredicted RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 GRM3Q14832 879 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms