RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 NOMO2Q5JPE7 1267 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CASP10Q92851 521 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 MAGED4Q96JG8 741 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 PNMA5Q96PV4 448 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 PORCNQ9H237 461 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 GANQ9H2C0 597 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 MARCH2Q9P0N8 246 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 PADI4Q9UM07 663 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ZC3H13Q5T200 1668 aaKnown RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 SF3B1O75533 1304 aaKnown RBP eCLIP6.55□□□□□ -1.363e-6■■■■■ 128.6
UBQLN1-206ENST00000533705 ADCY6O43306 1168 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 MAN1A2O60476 641 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 RASSF9O75901 435 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 APOA1P02647 267 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 LTFP02788 710 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ELNP15502 786 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 POLR2LP62875 67 aaKnown RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 DNAJC3Q13217 504 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 XRCC4Q13426 336 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 TCEA2Q15560 299 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 FUT11Q495W5 492 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 DEPDC1Q5TB30 811 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 C11orf63Q6NUN7 778 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 SLC26A11Q86WA9 606 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CCDC60Q8IWA6 550 aaPredicted RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CNDP1Q96KN2 507 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 UROC1Q96N76 676 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 GAS2L1Q99501 681 aaPredicted RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 FTHL17Q9BXU8 183 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 EXOSC4Q9NPD3 245 aaKnown RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 KRCC1Q9NPI7 259 aaPredicted RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 AHSPQ9NZD4 102 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 UBA2Q9UBT2 640 aaPredicted RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 SOX13Q9UN79 622 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 HES2Q9Y543 173 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 GAKO14976 1311 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ERI2A8K979 691 aaKnown RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 EML1O00423 815 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 MTA2O94776 668 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CPSF4O95639 269 aaKnown RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 KRT8P05787 483 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ADH1AP07327 375 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 TPBGLP0DKB5 382 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 TPH1P17752 444 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CD52P31358 61 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ALDH9A1P49189 494 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 COPAP53621 1224 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 SLC6A3Q01959 620 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CREMQ03060 361 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 TRIP10Q15642 601 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 TMEM119Q4V9L6 283 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 SETMARQ53H47 684 aaPredicted RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 NOL9Q5SY16 702 aaKnown RBP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 LENG9Q96B70 501 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 VCPIP1Q96JH7 1222 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 NLNQ9BYT8 704 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 PRKD2Q9BZL6 878 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ZDHHC6Q9H6R6 413 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 POPDC2Q9HBU9 364 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 MIEF1Q9NQG6 463 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 TRHDEQ9UKU6 1024 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 EIF3HO15372 352 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 YBX3P16989 372 aaKnown RBP eCLIP6.55□□□□□ -1.368e-9■■□□□ 13.4
UBQLN1-206ENST00000533705 HSD17B3P37058 310 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 NUDT2P50583 147 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 HLA-DQA1Q5Y7H0 255 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 WSCD1Q658N2 575 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 KIAA0319LQ8IZA0 1049 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CAMKK1Q8N5S9 505 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 KIAA0895Q8NCT3 520 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 OSCP1Q8WVF1 389 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 MKL1Q969V6 931 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ULBP1Q9BZM6 244 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 ABCC13Q9NSE7 274 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 NCKIPSDQ9NZQ3 722 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 CAPN6Q9Y6Q1 641 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 PXDNQ92626 1479 aa6.55□□□□□ -1.36
UBQLN1-206ENST00000533705 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 KRT6AP02538 564 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 KRT6BP04259 564 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 OR56A5P0C7T3 313 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 TCF3P15923 654 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 AMPD1P23109 780 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 CD151P48509 253 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 KRT6CP48668 564 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 UBE3AQ05086 875 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 RUNX1T1Q06455 604 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 SLC45A4Q5BKX6 768 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 C15orf52Q6ZUT6 534 aaKnown RBP6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 TRPM8Q7Z2W7 1104 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 CASKIN2Q8WXE0 1202 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 LPPQ93052 612 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 NSL1Q96IY1 281 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 PURBQ96QR8 312 aaKnown RBP6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 PAFAH2Q99487 392 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 TMEM134Q9H6X4 195 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 IMPAD1Q9NX62 359 aa6.54□□□□□ -1.36
UBQLN1-206ENST00000533705 TUBGCP4Q9UGJ1 667 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms