RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MUC3BQ9H195 1237 aa12.57□□□□□ -0.4
BDNF-218ENST00000533246 PPCSQ9HAB8 311 aa12.57□□□□□ -0.4
BDNF-218ENST00000533246 GBA2Q9HCG7 927 aaPredicted RBP12.57□□□□□ -0.4
BDNF-218ENST00000533246 PCYOX1Q9UHG3 505 aa12.57□□□□□ -0.4
BDNF-218ENST00000533246 SLC24A2Q9UI40 661 aa12.57□□□□□ -0.4
BDNF-218ENST00000533246 A0A1W2PPM1 405 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 SYNDIG1LA6NDD5 238 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 PTK6Q13882 451 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 RBBP7Q16576 425 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 N4BP2L1Q5TBK1 243 aaPredicted RBP12.56□□□□□ -0.4
BDNF-218ENST00000533246 TTC27Q6P3X3 843 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 LRRC8BQ6P9F7 803 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 HELQQ8TDG4 1101 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 LENG9Q96B70 501 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 RNF103O00237 685 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 SNX3O60493 162 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 MCF2P10911 925 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 RALBP11234 206 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 COPAP53621 1224 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CDCA2Q69YH5 1023 aaPredicted RBP12.56□□□□□ -0.4
BDNF-218ENST00000533246 CXCL17Q6UXB2 119 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 PTAR1Q7Z6K3 402 aaPredicted RBP12.56□□□□□ -0.4
BDNF-218ENST00000533246 UNC45BQ8IWX7 931 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CMTM5Q96DZ9 223 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 SYT15Q9BQS2 421 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 MRPL1Q9BYD6 325 aaKnown RBP12.56□□□□□ -0.4
BDNF-218ENST00000533246 ILKAPQ9H0C8 392 aaPredicted RBP12.56□□□□□ -0.4
BDNF-218ENST00000533246 GIMAP4Q9NUV9 329 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 C6orf203Q9P0P8 240 aaPredicted RBP12.56□□□□□ -0.4
BDNF-218ENST00000533246 LTN1O94822 1766 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 PRRG1O14668 218 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 FSCN2O14926 492 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 AKAP10O43572 662 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 LIASO43766 372 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 ERVK-10P10266 1014 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CPA3P15088 417 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CPT1AP50416 773 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 OAZ1P54368 228 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CSHL1Q14406 222 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 DNAL1Q4LDG9 190 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 WSCD1Q658N2 575 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 LRRC57Q8N9N7 239 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CDY2AQ9Y6F7 541 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 CDY1Q9Y6F8 540 aa12.56□□□□□ -0.4
BDNF-218ENST00000533246 ROBO3Q96MS0 1386 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ARHGAP10A1A4S6 786 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 RBAK-RBAKDNI3L0D1 243 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 CXCL11O14625 94 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ANGPT2O15123 496 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 BUD23O43709 281 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 KLHL2O95198 593 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 VAPBO95292 243 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 BDNFP23560 247 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 CCR3P51677 355 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 GTF2A2P52657 109 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 VEPH1Q14D04 833 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 C14orf80Q86SX3 495 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ZCCHC9Q8N567 271 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 LRRC40Q9H9A6 602 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 RXFP1Q9HBX9 757 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 NT5MQ9NPB1 228 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 SLC30A1Q9Y6M5 507 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 COL1A1P02452 1464 aaPredicted RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 FCHO1O14526 889 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 DDX3YO15523 660 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 ASS1P00966 412 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 APOC2P02655 101 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 PPARGP37231 505 aaPredicted RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 PTPN20Q4JDL3 420 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 NDRG1Q92597 394 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 LGMNQ99538 433 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 LRRC19Q9H756 370 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 CATSPERBQ9H7T0 1116 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ZFYVE28Q9HCC9 887 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 DOLKQ9UPQ8 538 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 MYH2Q9UKX2 1941 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 A0A0B4J269 797 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 SUPT3HB4E1H0 165 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 CLDN5O00501 218 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ADSSP30520 456 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 RARS2Q5T160 578 aaKnown RBP12.55□□□□□ -0.4
BDNF-218ENST00000533246 SCUBE1Q8IWY4 988 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms