RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 GLI1P08151 1106 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 TMEM253P0C7T8 217 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 RALAP11233 206 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 KRT3P12035 628 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 PDGFRAP16234 1089 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 DDX6P26196 483 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 IL1R2P27930 398 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 CORO1AP31146 461 aaKnown RBP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 ATP5C1P36542 298 aaKnown RBP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 SLC19A1P41440 591 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 MAGEA1P43355 309 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 TRIP4Q15650 581 aaPredicted RBP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 CA9Q16790 459 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 EFHC1Q5JVL4 640 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 C10orf76Q5T2E6 689 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 KLHDC10Q6PID8 442 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 BEND5Q7L4P6 421 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 C14orf80Q86SX3 495 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 ZNF276Q8N554 614 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 TTC8Q8TAM2 541 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 RNF139Q8WU17 664 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 VCPIP1Q96JH7 1222 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 PRICKLE1Q96MT3 831 aaPredicted RBP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 SELENOOQ9BVL4 669 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 NUP85Q9BW27 656 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM49-202ENST00000532501 EHD2Q9NZN4 543 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 DNMT3LQ9UJW3 386 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 PCDHA13Q9Y5I0 950 aa8.32□□□□□ -1.08
TRIM49-202ENST00000532501 USP27XA6NNY8 438 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 M0QYT0 321 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 TRIM24O15164 1050 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 LRCH4O75427 683 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ENDOD1O94919 500 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 MOCS2O96007 188 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 GPD1P21695 349 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 WEE1P30291 646 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 SLC6A4P31645 630 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 NOS2P35228 1153 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 AVPR1AP37288 418 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 SOX9P48436 509 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PPP3CCP48454 512 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 TBX4P57082 545 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 TAS2R40P59535 323 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 GPC5P78333 572 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 KRT83P78385 493 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PRR20EP86478 221 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PRR20CP86479 221 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PRR20DP86480 221 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PRR20BP86481 221 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PRR20AP86496 221 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 NME3Q13232 169 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 SPA17Q15506 151 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 SLC25A52Q3SY17 297 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 FAM133BQ5BKY9 247 aaKnown RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 PIK3R6Q5UE93 754 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ARCQ7LC44 396 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 CIR1Q86X95 450 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ZDHHC17Q8IUH5 632 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 SFTPA1Q8IWL2 248 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ARHGAP18Q8N392 663 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 C17orf53Q8N3J3 647 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 SLC44A3Q8N4M1 653 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 CCDC185Q8N715 623 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ZNF564Q8TBZ8 553 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 BPIFB1Q8TDL5 484 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 FAM172AQ8WUF8 416 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 CENPIQ92674 756 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ELSPBP1Q96BH3 223 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ACSF2Q96CM8 615 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 TRIM44Q96DX7 344 aaPredicted RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 FAM83CQ9BQN1 747 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 FAM204AQ9H8W3 233 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ZFP14Q9HCL3 533 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 WDR35Q9P2L0 1181 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 MUTYHQ9UIF7 546 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 ANAPC7Q9UJX3 599 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 AGO1Q9UL18 857 aaKnown RBP8.31□□□□□ -1.08
TRIM49-202ENST00000532501 STRIP2Q9ULQ0 834 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 CLEC4EQ9ULY5 219 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 NEU3Q9UQ49 428 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 COL4A2P08572 1712 aa8.31□□□□□ -1.08
TRIM49-202ENST00000532501 KIF26AQ9ULI4 1882 aaPredicted RBP8.3□□□□□ -1.08
TRIM49-202ENST00000532501 TMEM110-MUSTN1A8MSY1 372 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 KCNU1A8MYU2 1149 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 FAM72CH0Y354 149 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 CAPN9O14815 690 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 BUB1O43683 1085 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 ECI2O75521 394 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 CYP17A1P05093 508 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 MYBL1P10243 752 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 TCF3P15923 654 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 PSMA2P25787 234 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 GDI1P31150 447 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 PTPN9P43378 593 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 MARCKSL1P49006 195 aa8.3□□□□□ -1.08
TRIM49-202ENST00000532501 CXCR3P49682 368 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms