RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 TMPRSS7Q7RTY8 843 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 CCDC186Q7Z3E2 898 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 UNC93AQ86WB7 457 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 TMPRSS6Q8IU80 811 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 ZC3H3Q8IXZ2 948 aaKnown RBP9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 CADM4Q8NFZ8 388 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 TMEM174Q8WUU8 243 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 MIR1-1HGQ9H1L0 117 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 KCTD10Q9H3F6 313 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 GAREM1Q9H706 876 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 TM7SF3Q9NS93 570 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 KIAA1522Q9P206 1035 aaPredicted RBP9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 EIF2B4Q9UI10 523 aaKnown RBP9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 LSM7Q9UK45 103 aaKnown RBP9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 USP3Q9Y6I4 520 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 A0A1B0GVT2 93 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 POLR2DO15514 142 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 ZNF883P0CG24 379 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 C7P10643 843 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 HLA-EP13747 358 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 GNSP15586 552 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 ACSL1P33121 698 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 KCNC4Q03721 635 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 PPP3CAQ08209 521 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 KIF19Q2TAC6 998 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 RBM43Q6ZSC3 357 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 BHLHA9Q7RTU4 235 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 FAM217AQ8IXS0 508 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 ZNF276Q8N554 614 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 IQUBQ8NA54 791 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 SETD7Q8WTS6 366 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 CYFIP2Q96F07 1278 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 ORAI3Q9BRQ5 295 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 ZDHHC5Q9C0B5 715 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 NUP62CLQ9H1M0 184 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 C6orf106Q9H6K1 298 aaPredicted RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 PNPLA8Q9NP80 782 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 DKK4Q9UBT3 224 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 DNMT3LQ9UJW3 386 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 AGO1Q9UL18 857 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 APOBEC2Q9Y235 224 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 PCDHA5Q9Y5H7 936 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
CHMP4A-205ENST00000531158 PVALEFA0A1B0GWK0 134 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 FAM149AA5PLN7 773 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 KCNK3O14649 394 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 BCAT2O15382 392 aaPredicted RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 CUTAO60888 179 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 HLA-DRAP01903 254 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 HMBSP08397 361 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 MATKP42679 507 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 AFMP43652 599 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 CSNK1EP49674 416 aaKnown RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 AP3M2P53677 418 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 AMPD3Q01432 767 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 STARD3Q14849 445 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 PTPRNQ16849 979 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 SGSM1Q2NKQ1 1148 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 FAM124AQ86V42 546 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 SLC9A9Q8IVB4 645 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 ZNF366Q8N895 744 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 TAF4BQ92750 862 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 SIPA1Q96FS4 1042 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 SPATA32Q96LK8 384 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 ELOVL2Q9NXB9 296 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 CLIC5Q9NZA1 410 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 CGNQ9P2M7 1197 aaKnown RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 RASAL2Q9UJF2 1139 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 COL27A1Q8IZC6 1860 aaPredicted RBP9.64□□□□□ -0.87
CHMP4A-205ENST00000531158 TDRD6O60522 2096 aaKnown RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 PIEZO2Q9H5I5 2752 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 A0A087WV48 116 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 GOLGA6L4A6NEF3 574 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 TRABD2BA6NFA1 517 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 PYCARD-AS1I3L0S3 204 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 TULP2O00295 520 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CAPN9O14815 690 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 FLRT2O43155 660 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 ACTN4O43707 911 aaKnown RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CLSTN1O94985 981 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 YEATS4O95619 227 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 CER1O95813 267 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 NR3C1P04150 777 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 RPN1P04843 607 aaKnown RBP9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 EPHX1P07099 455 aa9.63□□□□□ -0.87
CHMP4A-205ENST00000531158 TPM2P07951 284 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms