RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SFPQP23246 707 aaKnown RBP eCLIP5.32□□□□□ -1.56
CTR9-204ENST00000529355 IDUAP35475 653 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 STAT6P42226 847 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 VPS41P49754 854 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 RPL15P61313 204 aaKnown RBP5.32□□□□□ -1.56
CTR9-204ENST00000529355 YPEL5P62699 121 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 POSTNQ15063 836 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 AAK1Q2M2I8 961 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 GRAMD1BQ3KR37 738 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 SUPT20HL1Q3ZLR7 823 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 DENND2CQ68D51 928 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 TRABD2AQ86V40 505 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 NGDNQ8NEJ9 315 aaKnown RBP5.32□□□□□ -1.56
CTR9-204ENST00000529355 CLEC4CQ8WTT0 213 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 IGFBPL1Q8WX77 278 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 OVCA2Q8WZ82 227 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 AKAP1Q92667 903 aaKnown RBP eCLIP5.32□□□□□ -1.56
CTR9-204ENST00000529355 RILPL2Q969X0 211 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 EID2BQ96D98 161 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 FYTTD1Q96QD9 318 aaKnown RBP5.32□□□□□ -1.56
CTR9-204ENST00000529355 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
CTR9-204ENST00000529355 FBXO28Q9NVF7 368 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 B3GNT3Q9Y2A9 372 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 FRMD4BQ9Y2L6 1034 aa5.32□□□□□ -1.56
CTR9-204ENST00000529355 BTBD19C9JJ37 291 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 PRKAA2P54646 552 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 FOXL2P58012 376 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 KRT72Q14CN4 511 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 KIAA1324Q6UXG2 1013 aaKnown RBP5.31□□□□□ -1.56
CTR9-204ENST00000529355 RASGRP2Q7LDG7 609 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 SLC44A2Q8IWA5 706 aaPredicted RBP5.31□□□□□ -1.56
CTR9-204ENST00000529355 NRSN1Q8IZ57 195 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 OR52L2PQ8NGH6 319 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 CSGALNACT1Q8TDX6 532 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 GPR78Q96P69 363 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 RTKNQ9BST9 563 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 CCDC134Q9H6E4 229 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 PRDM8Q9NQV8 689 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 RXFP3Q9NSD7 469 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 ASNSD1Q9NWL6 643 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 SRP68Q9UHB9 627 aaKnown RBP5.31□□□□□ -1.56
CTR9-204ENST00000529355 HERC5Q9UII4 1024 aaKnown RBP5.31□□□□□ -1.56
CTR9-204ENST00000529355 TRPC5Q9UL62 973 aaPredicted RBP5.31□□□□□ -1.56
CTR9-204ENST00000529355 RCE1Q9Y256 329 aa5.31□□□□□ -1.56
CTR9-204ENST00000529355 AGAP5A6NIR3 686 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 SLC38A8A6NNN8 435 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 ITGA2BP08514 1039 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 NDUFS1P28331 727 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 HALP42357 657 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 SRSF4Q08170 494 aaKnown RBP5.3□□□□□ -1.56
CTR9-204ENST00000529355 SF3A3Q12874 501 aaKnown RBP eCLIP5.3□□□□□ -1.56
CTR9-204ENST00000529355 TAF5Q15542 800 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 TRIM60Q495X7 471 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 GALNTL6Q49A17 601 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 LRRC24Q50LG9 513 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 COLEC12Q5KU26 742 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 CC2D1BQ5T0F9 858 aaKnown RBP5.3□□□□□ -1.56
CTR9-204ENST00000529355 DPY19L2P1Q6NXN4 242 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 KLHL17Q6TDP4 642 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 TTC30AQ86WT1 665 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 OTUD7AQ8TE49 926 aaPredicted RBP5.3□□□□□ -1.56
CTR9-204ENST00000529355 HMGB4Q8WW32 186 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 GLMPQ8WWB7 406 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 MAP4K1Q92918 833 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 ARHGAP39Q9C0H5 1083 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 KCNK9Q9NPC2 374 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 SLC12A4Q9UP95 1085 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 ZBTB1Q9Y2K1 713 aa5.3□□□□□ -1.56
CTR9-204ENST00000529355 MORC2Q9Y6X9 1032 aaPredicted RBP5.3□□□□□ -1.56
CTR9-204ENST00000529355 SMIM35A0A1B0GVV1 85 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 TMEM232C9JQI7 657 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 UBE2Q2LH0YL09 131 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 IFRD1O00458 451 aaPredicted RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 TP73O15350 636 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 TPD52L2O43399 206 aaKnown RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 CELA2AP08217 269 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 CHRM5P08912 532 aaPredicted RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 MMP8P22894 467 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 DUSP1P28562 367 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 ZNF84P51523 738 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 C21orf58P58505 322 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 AP2B1P63010 937 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 RNASELQ05823 741 aaKnown RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 CNGA3Q16281 694 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 YTHDF3Q7Z739 585 aaKnown RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 CCDC117Q8IWD4 279 aaPredicted RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 NKAPQ8N5F7 415 aaKnown RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 ZNF398Q8TD17 642 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 WDR60Q8WVS4 1066 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 NELL1Q92832 810 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 CELF1Q92879 486 aaKnown RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 REXO5Q96IC2 774 aaKnown RBP5.29□□□□□ -1.56
CTR9-204ENST00000529355 NUAK2Q9H093 628 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 BRD8Q9H0E9 1235 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 ITM2CQ9NQX7 267 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 KCND3Q9UK17 655 aa5.29□□□□□ -1.56
CTR9-204ENST00000529355 PCDHA10Q9Y5I2 948 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms