RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 EIF3DO15371 548 aaKnown RBP eCLIP19.89■□□□□ 0.77
SSRP1-204ENST00000529002 RRP8O43159 456 aaKnown RBP19.89■□□□□ 0.77
SSRP1-204ENST00000529002 RFPL3O75679 317 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 LDOC1O95751 146 aaPredicted RBP19.89■□□□□ 0.77
SSRP1-204ENST00000529002 C4BPAP04003 597 aaKnown RBP19.89■□□□□ 0.77
SSRP1-204ENST00000529002 IGHV4-34P06331 123 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 HNF1BP35680 557 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 CHKAP35790 457 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 ARID5AQ03989 594 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 BMT2Q1RMZ1 405 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 FNDC3BQ53EP0 1204 aaKnown RBP19.89■□□□□ 0.77
SSRP1-204ENST00000529002 DDI1Q8WTU0 396 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 EBF2Q9HAK2 575 aa19.89■□□□□ 0.77
SSRP1-204ENST00000529002 FAM47DPA6NHR8 397 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 PAPSS1O43252 624 aaPredicted RBP19.88■□□□□ 0.77
SSRP1-204ENST00000529002 ACADVLP49748 655 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 KIF11P52732 1056 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 CXADRP78310 365 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 EIF4HQ15056 248 aaKnown RBP19.88■□□□□ 0.77
SSRP1-204ENST00000529002 FAM26FQ5R3K3 315 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 ZC3H3Q8IXZ2 948 aaKnown RBP19.88■□□□□ 0.77
SSRP1-204ENST00000529002 EID2Q8N6I1 236 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 LSM14AQ8ND56 463 aaKnown RBP19.88■□□□□ 0.77
SSRP1-204ENST00000529002 SNIP1Q8TAD8 396 aaKnown RBP19.88■□□□□ 0.77
SSRP1-204ENST00000529002 TMEM245Q9H330 911 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 PRSS16Q9NQE7 514 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 ZNF510Q9Y2H8 683 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 PCDHGA1Q9Y5H4 931 aa19.88■□□□□ 0.77
SSRP1-204ENST00000529002 TDRD6O60522 2096 aaKnown RBP19.88■□□□□ 0.77
SSRP1-204ENST00000529002 CAPN9O14815 690 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 WNT9AO14904 365 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 BRINP1O60477 761 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 KIF20AO95235 890 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 CASP1P29466 404 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 HLA-FP30511 346 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 C21orf59P57076 290 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 ASIC1P78348 528 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 DLG4P78352 724 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 RTP5Q14D33 572 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 INAVAQ3KP66 663 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 FBXL19Q6PCT2 694 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 CYFIP2Q96F07 1278 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 HNRNPABQ99729 332 aaKnown RBP19.87■□□□□ 0.77
SSRP1-204ENST00000529002 PCDHA5Q9Y5H7 936 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 ATMQ13315 3056 aa19.87■□□□□ 0.77
SSRP1-204ENST00000529002 TEX51A0A1B0GUA7 166 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 EXOC3O60645 756 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 CYBBP04839 570 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 ITGAVP06756 1048 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 RALAP11233 206 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 ASPAP45381 313 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 BCAT1P54687 386 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 TLE3Q04726 772 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 RABEP1Q15276 862 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 CHST9Q7L1S5 443 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 SPACA3Q8IXA5 215 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 SAP25Q8TEE9 199 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 PARD3BQ8TEW8 1205 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 BAP1Q92560 729 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 FGF11Q92914 225 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 NAF1Q96HR8 494 aaKnown RBP19.86■□□□□ 0.77
SSRP1-204ENST00000529002 ELF4Q99607 663 aaPredicted RBP19.86■□□□□ 0.77
SSRP1-204ENST00000529002 ARID3AQ99856 593 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 ACE2Q9BYF1 805 aaPredicted RBP19.86■□□□□ 0.77
SSRP1-204ENST00000529002 SEMA4CQ9C0C4 833 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 NRSN2Q9GZP1 204 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 SERGEFQ9UGK8 458 aa19.86■□□□□ 0.77
SSRP1-204ENST00000529002 HECTD1Q9ULT8 2610 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 SLC12A8A0AV02 714 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 VILLO15195 856 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 DNTTP04053 509 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 ABCB4P21439 1286 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 HOXD9P28356 352 aaPredicted RBP19.85■□□□□ 0.77
SSRP1-204ENST00000529002 COG7P83436 770 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 BNIP3Q12983 259 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 KIAA0895LQ68EN5 471 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 CCDC186Q7Z3E2 898 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 CPXM2Q8N436 756 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 DCLK3Q9C098 648 aa19.85■□□□□ 0.77
SSRP1-204ENST00000529002 TIMM44O43615 452 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 KRT10P13645 584 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 RACK1P63244 317 aaKnown RBP19.84■□□□□ 0.77
SSRP1-204ENST00000529002 E2F4Q16254 413 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 TAF1BQ53T94 588 aaPredicted RBP19.84■□□□□ 0.77
SSRP1-204ENST00000529002 ADIPOR2Q86V24 386 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 UNC93AQ86WB7 457 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 ERICH1Q86X53 443 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 WFDC5Q8TCV5 224 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 TSC1Q92574 1164 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 NDRG1Q92597 394 aaKnown RBP19.84■□□□□ 0.77
SSRP1-204ENST00000529002 TMEM176AQ96HP8 235 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 USP28Q96RU2 1077 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 SLC2A11Q9BYW1 496 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 TNMDQ9H2S6 317 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 ABCB8Q9NUT2 735 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 KBTBD4Q9NVX7 518 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 MARCH2Q9P0N8 246 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 USP3Q9Y6I4 520 aa19.84■□□□□ 0.77
SSRP1-204ENST00000529002 NYNRINQ9P2P1 1898 aaKnown RBP19.84■□□□□ 0.77
SSRP1-204ENST00000529002 A0A1W2PPC4 97 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms