RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PRPSAP1Q14558 356 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 TDRD10Q5VZ19 366 aaKnown RBP18.4■□□□□ 0.54
LTBP3-210ENST00000528516 NCCRP1Q6ZVX7 275 aaPredicted RBP18.4■□□□□ 0.54
LTBP3-210ENST00000528516 HASPINQ8TF76 798 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 TMA16Q96EY4 203 aaKnown RBP18.4■□□□□ 0.54
LTBP3-210ENST00000528516 C2orf40Q9H1Z8 148 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 USP18Q9UMW8 372 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 TSC22D4Q9Y3Q8 395 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 AK5Q9Y6K8 562 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 TMED10P49755 219 aaKnown RBP18.4■□□□□ 0.54
LTBP3-210ENST00000528516 PSMD7P51665 324 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 RPL10AP62906 217 aaKnown RBP18.4■□□□□ 0.54
LTBP3-210ENST00000528516 DUS1LQ6P1R4 473 aaKnown RBP18.4■□□□□ 0.54
LTBP3-210ENST00000528516 KLHL35Q6PF15 583 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 LPCAT2Q7L5N7 544 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 BEST2Q8NFU1 509 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 RNF139Q8WU17 664 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 FSD1LQ9BXM9 530 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 CAAP1Q9H8G2 361 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 FAM8A1Q9UBU6 413 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 BCORQ6W2J9 1755 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 CYB561D2O14569 222 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 GPX6P59796 221 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 AMIGO2Q86SJ2 522 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 SHC3Q92529 594 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 SERAC1Q96JX3 654 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 EBF4Q9BQW3 602 aa18.4■□□□□ 0.54
LTBP3-210ENST00000528516 CYP3A7-CYP3A51PA0A087WV96 503 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 B4GALT5O43286 388 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 GPD1P21695 349 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 CYP3A7P24462 503 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 AKAP5P24588 427 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 AVPR1AP37288 418 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 SULT1E1P49888 294 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 MXD4Q14582 209 aaPredicted RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 MYLK3Q32MK0 819 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 SLC7A14Q8TBB6 771 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 DCUN1D1Q96GG9 259 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 SPON2Q9BUD6 331 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 SHOC2Q9UQ13 582 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 AP4B1Q9Y6B7 739 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 KBTBD13C9JR72 458 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 TPD52L2O43399 206 aaKnown RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 TGDSO95455 350 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 TPH1P17752 444 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 KLRC2P26717 231 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 RBP5P82980 135 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 PDZD8Q8NEN9 1154 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 CDC26Q8NHZ8 85 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 FAM193BQ96PV7 902 aaPredicted RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 XPOTO43592 962 aaKnown RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 CST3P01034 146 aaPredicted RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 SNRPAP09012 282 aaKnown RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 FAM58BPP0C7Q3 252 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 TBL3Q12788 808 aaKnown RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 DENND1BQ6P3S1 775 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 IL1RL2Q9HB29 575 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 DNAJB4Q9UDY4 337 aa18.39■□□□□ 0.53
LTBP3-210ENST00000528516 BARX2Q9UMQ3 279 aaPredicted RBP18.39■□□□□ 0.53
LTBP3-210ENST00000528516 CASQ2O14958 399 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 STAG3L1P0CL83 205 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 KCNA4P22459 653 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 NSUN2Q08J23 767 aaKnown RBP eCLIP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 MSLNQ13421 630 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 KIF19Q2TAC6 998 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 STYK1Q6J9G0 422 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 AFAP1L2Q8N4X5 818 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 BHMTQ93088 406 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 GPRASP2Q96D09 838 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ACSS3Q9H6R3 686 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 SLC39A10Q9ULF5 831 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 HEMK1Q9Y5R4 338 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 VILLO15195 856 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ADCY6O43306 1168 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 TPST1O60507 370 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 TSPAN3O60637 253 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 SEC24DO94855 1032 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ALOX15P16050 662 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 FNBP1LQ5T0N5 605 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ANKRD22Q5VYY1 191 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 OLFML1Q6UWY5 402 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 TMC7Q7Z402 723 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 C12orf29Q8N999 325 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 JADE3Q92613 823 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ERLEC1Q96DZ1 483 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 PRICKLE1Q96MT3 831 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 RRN3Q9NYV6 651 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 PSTPIP1O43586 416 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 FAM155BO75949 473 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 MSX2P35548 267 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-210ENST00000528516 GJA8P48165 433 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 TLR1Q15399 786 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 C16orf87Q6PH81 154 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ADGRD1Q6QNK2 874 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ZBTB46Q86UZ6 589 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 EXD1Q8NHP7 514 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 GAB3Q8WWW8 586 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 ATXN3LQ9H3M9 355 aa18.38■□□□□ 0.53
LTBP3-210ENST00000528516 V9GYQ6 96 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms