RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 F5H423 210 aaPredicted RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 ZBTB14O43829 449 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 S100A1P23297 94 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 ME2P23368 584 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 CLCN2P51788 898 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 RHBDL3P58872 404 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 TUBB3Q13509 450 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 HADHQ16836 314 aaKnown RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 CCDC153Q494R4 210 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 BSPRYQ5W0U4 402 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 LZTR1Q8N653 840 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 CXorf21Q9HAI6 301 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 VPS45Q9NRW7 570 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 CROTQ9UKG9 612 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 CRHR1P34998 444 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 GCNT1Q02742 428 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 INAQ16352 499 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 PERM1Q5SV97 790 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 TRMT10BQ6PF06 316 aaKnown RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 GPR180Q86V85 440 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 HPS1Q92902 700 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 GIN1Q9NXP7 522 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 TXNDC16Q9P2K2 825 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 TEX264Q9Y6I9 313 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 ASTN2O75129 1339 aaPredicted RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 COL22A1Q8NFW1 1626 aaPredicted RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 A0A087WXM4 84 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 H3BNH8 94 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 RNASEH2AO75792 299 aaKnown RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 PSMD10O75832 226 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 UFL1O94874 794 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 RALBP11234 206 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 MS4A2Q01362 244 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 NEDD8Q15843 81 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 FGD3Q5JSP0 725 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 NANOGP8Q6NSW7 305 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 NIPAL1Q6NVV3 410 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 RWDD4Q6NW29 188 aaKnown RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 NPNTQ6UXI9 565 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 UBR7Q8N806 425 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TAMM41Q96BW9 452 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 COG4Q9H9E3 785 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TTLL3Q9Y4R7 772 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 C7orf72A4D263 438 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TMEM191CA6NGB0 347 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 ATE1O95260 518 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TMEM191BP0C7N4 346 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 ARP10275 920 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TSHRP16473 764 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 CDK18Q07002 472 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 NME3Q13232 169 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 SHROOM1Q2M3G4 852 aaPredicted RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 MGAT5BQ3V5L5 792 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 IL23RQ5VWK5 629 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 OSBPL11Q9BXB4 747 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 STN1Q9H668 368 aaKnown RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 WDR41Q9HAD4 459 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 KCNN4O15554 427 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 PRDX6P30041 224 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 RAB15P59190 212 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TCP10Q12799 353 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 ITPK1Q13572 414 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 NFIXQ14938 502 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 SLC9A4Q6AI14 798 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 TMEM26Q6ZUK4 368 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 MAVSQ7Z434 540 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 LRTOMTQ8WZ04 291 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 WNK4Q96J92 1243 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 MARK4Q96L34 752 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 CCDC138Q96M89 665 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 RANBP9Q96S59 729 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 WDR55Q9H6Y2 383 aaPredicted RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 TCF7L2Q9NQB0 619 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 ACSS2Q9NR19 701 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 UTP6Q9NYH9 597 aaKnown RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 VPS51Q9UID3 782 aa12.84□□□□□ -0.35
TSKU-203ENST00000527881 PRPF19Q9UMS4 504 aaKnown RBP12.84□□□□□ -0.35
TSKU-203ENST00000527881 GMNNO75496 209 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 APOEP02649 317 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 AMHP03971 560 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 MYL4P12829 197 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 JAK1P23458 1154 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
TSKU-203ENST00000527881 OGDHQ02218 1023 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
TSKU-203ENST00000527881 PIGHQ14442 188 aaPredicted RBP12.83□□□□□ -0.36
TSKU-203ENST00000527881 LDLRAP1Q5SW96 308 aa12.83□□□□□ -0.36
TSKU-203ENST00000527881 MBLAC2Q68D91 279 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms