RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ARID3AQ99856 593 aa25.07■■□□□ 1.6
USP47-205ENST00000525257 NUP58Q9BVL2 599 aa25.07■■□□□ 1.6
USP47-205ENST00000525257 APOBEC2Q9Y235 224 aaKnown RBP25.07■■□□□ 1.6
USP47-205ENST00000525257 CER1O95813 267 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 IGLV3-19P01714 112 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 HLA-EP13747 358 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 RPL13P26373 211 aaKnown RBP25.06■■□□□ 1.6
USP47-205ENST00000525257 MATKP42679 507 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 TKTL1P51854 596 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 RAD23BP54727 409 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 BNC1Q01954 994 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 ENPEPQ07075 957 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 ADAM9Q13443 819 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 E2F5Q15329 346 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 SLCO6A1Q86UG4 719 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 SNX19Q92543 992 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 NDRG1Q92597 394 aaKnown RBP25.06■■□□□ 1.6
USP47-205ENST00000525257 PLD4Q96BZ4 506 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 SLC2A11Q9BYW1 496 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 UBXN6Q9BZV1 441 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 FNDC3AQ9Y2H6 1198 aaKnown RBP25.06■■□□□ 1.6
USP47-205ENST00000525257 PLXNB3Q9ULL4 1909 aa25.06■■□□□ 1.6
USP47-205ENST00000525257 TSPAN3O60637 253 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 SYKP43405 635 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 MXI1P50539 228 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 ARHGAP17Q68EM7 881 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 FAM217AQ8IXS0 508 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 TTC39CQ8N584 583 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 ULBP1Q9BZM6 244 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 TM7SF3Q9NS93 570 aa25.05■■□□□ 1.6
USP47-205ENST00000525257 ZBED1O96006 694 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 GTF2H1P32780 548 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 SLC8A3P57103 927 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 DPYDQ12882 1025 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 HLA-BQ31612 363 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 IL27RAQ6UWB1 636 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 CCNI2Q6ZMN8 369 aaPredicted RBP25.04■■□□□ 1.6
USP47-205ENST00000525257 GLRX5Q86SX6 157 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 FMNL3Q8IVF7 1028 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 GUF1Q8N442 669 aaKnown RBP25.04■■□□□ 1.6
USP47-205ENST00000525257 ANKRD52Q8NB46 1076 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 FBXL13Q8NEE6 735 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 OR2T3Q8NH03 318 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 EEF2KMTQ96G04 330 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 SLCO1B1Q9Y6L6 691 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 NUMA1Q14980 2115 aa25.04■■□□□ 1.6
USP47-205ENST00000525257 MUC22E2RYF6 1773 aaPredicted RBP25.03■■□□□ 1.6
USP47-205ENST00000525257 FASNP49327 2511 aaKnown RBP25.03■■□□□ 1.6
USP47-205ENST00000525257 A0A1B0GVT2 93 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 TULP2O00295 520 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 ZNF883P0CG24 379 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 HOXD9P28356 352 aaPredicted RBP25.03■■□□□ 1.6
USP47-205ENST00000525257 NDUFA8P51970 172 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 TRIP4Q15650 581 aaPredicted RBP25.03■■□□□ 1.6
USP47-205ENST00000525257 GOLGA7BQ2TAP0 167 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 FNDC3BQ53EP0 1204 aaKnown RBP25.03■■□□□ 1.6
USP47-205ENST00000525257 MPPE1Q53F39 396 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 C19orf48Q6RUI8 117 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 BHLHA9Q7RTU4 235 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 ZNF366Q8N895 744 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 C1orf216Q8TAB5 229 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 CYB5D2Q8WUJ1 264 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 TATDN2Q93075 761 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 SPATA32Q96LK8 384 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 LHX5Q9H2C1 402 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 RAB20Q9NX57 234 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 ADAMTS20P59510 1910 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 PTPRBP23467 1997 aa25.03■■□□□ 1.6
USP47-205ENST00000525257 TIMM44O43615 452 aa25.02■■□□□ 1.6
USP47-205ENST00000525257 HLA-FP30511 346 aa25.02■■□□□ 1.6
USP47-205ENST00000525257 HARS2P49590 506 aaKnown RBP25.02■■□□□ 1.6
USP47-205ENST00000525257 CSNK1EP49674 416 aaKnown RBP25.02■■□□□ 1.6
USP47-205ENST00000525257 ZCWPW2Q504Y3 356 aa25.02■■□□□ 1.6
USP47-205ENST00000525257 PM20D1Q6GTS8 502 aa25.02■■□□□ 1.6
USP47-205ENST00000525257 FAXDC2Q96IV6 333 aa25.02■■□□□ 1.6
USP47-205ENST00000525257 CCDC86Q9H6F5 360 aaKnown RBP25.02■■□□□ 1.6
USP47-205ENST00000525257 C6orf106Q9H6K1 298 aaPredicted RBP25.02■■□□□ 1.6
USP47-205ENST00000525257 OLA1Q9NTK5 396 aaKnown RBP25.02■■□□□ 1.6
USP47-205ENST00000525257 GPSM3Q9Y4H4 160 aa25.02■■□□□ 1.6
USP47-205ENST00000525257 ACSL1P33121 698 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 PDE4CQ08493 712 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 CAMK2GQ13555 558 aaPredicted RBP25.01■■□□□ 1.59
USP47-205ENST00000525257 CHST9Q7L1S5 443 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 EDEM1Q92611 657 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 LRRC4Q9HBW1 653 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 SFMBT1Q9UHJ3 866 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 TSPAN16Q9UKR8 245 aa25.01■■□□□ 1.59
USP47-205ENST00000525257 KNL1Q8NG31 2342 aa25■■□□□ 1.59
USP47-205ENST00000525257 XPO1O14980 1071 aaKnown RBP25■■□□□ 1.59
USP47-205ENST00000525257 AFF3P51826 1226 aaKnown RBP25■■□□□ 1.59
USP47-205ENST00000525257 BCAT1P54687 386 aa25■■□□□ 1.59
USP47-205ENST00000525257 ADIGQ0VDE8 80 aa25■■□□□ 1.59
USP47-205ENST00000525257 ACAP1Q15027 740 aa25■■□□□ 1.59
USP47-205ENST00000525257 BAHD1Q8TBE0 780 aaPredicted RBP25■■□□□ 1.59
USP47-205ENST00000525257 MDM1Q8TC05 714 aa25■■□□□ 1.59
USP47-205ENST00000525257 RHBDD1Q8TEB9 315 aa25■■□□□ 1.59
USP47-205ENST00000525257 WFIKKN2Q8TEU8 576 aa25■■□□□ 1.59
USP47-205ENST00000525257 RNF139Q8WU17 664 aa25■■□□□ 1.59
USP47-205ENST00000525257 IPO9Q96P70 1041 aaKnown RBP25■■□□□ 1.59
USP47-205ENST00000525257 PCED1AQ9H1Q7 454 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms