RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 F8VP50 259 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 SERPINA4P29622 427 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 FAM46CQ5VWP2 391 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 KIRREL3Q8IZU9 778 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 ZNF384Q8TF68 577 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 AHCYL2Q96HN2 611 aaKnown RBP17.53■□□□□ 0.4
BEST1-203ENST00000524877 MS4A14Q96JA4 679 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 BBS2Q9BXC9 721 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 LZTS1Q9Y250 596 aa17.53■□□□□ 0.4
BEST1-203ENST00000524877 EXD1Q8NHP7 514 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 ORC6Q9Y5N6 252 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 NFATC1O95644 943 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 SNRPD1P62314 119 aaKnown RBP17.52■□□□□ 0.4
BEST1-203ENST00000524877 DLG4P78352 724 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 IL1RL1Q01638 556 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 DUSP4Q13115 394 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 NT5DC1Q5TFE4 455 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 VSTM1Q6UX27 236 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 FAM35AQ86V20 835 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 NUDT5Q9UKK9 219 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 APOBEC2Q9Y235 224 aaKnown RBP17.52■□□□□ 0.4
BEST1-203ENST00000524877 SETD1AO15047 1707 aaKnown RBP17.52■□□□□ 0.4
BEST1-203ENST00000524877 A0A0A6YYK5 440 aaPredicted RBP17.52■□□□□ 0.4
BEST1-203ENST00000524877 MTA2O94776 668 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 CSE1LP55060 971 aaKnown RBP17.52■□□□□ 0.4
BEST1-203ENST00000524877 SPDYE7PQ495Y7 208 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 CACUL1Q86Y37 369 aa17.52■□□□□ 0.4
BEST1-203ENST00000524877 VPS26AO75436 327 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 MZF1P28698 734 aaPredicted RBP17.52■□□□□ 0.39
BEST1-203ENST00000524877 TARBP2Q15633 366 aaKnown RBP17.52■□□□□ 0.39
BEST1-203ENST00000524877 SLC13A5Q86YT5 568 aaPredicted RBP17.52■□□□□ 0.39
BEST1-203ENST00000524877 TMCO5AQ8N6Q1 288 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 TEKT4Q8WW24 435 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 TEPSINQ96N21 525 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 LNPEPQ9UIQ6 1025 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 CHMP2BQ9UQN3 213 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 ITM2BQ9Y287 266 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 SPACA6W5XKT8 324 aa17.52■□□□□ 0.39
BEST1-203ENST00000524877 C21orf59P57076 290 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 RAP1GAP2Q684P5 730 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 USP45Q70EL2 814 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CCNJLQ8IV13 435 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 FAM129AQ9BZQ8 928 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 ABCB6Q9NP58 842 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 SEPT3Q9UH03 358 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CACNA1FO60840 1977 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 ERVK-10P10266 1014 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CASP5P51878 434 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 THOP1P52888 689 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 SMAD3P84022 425 aaKnown RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 CBWD6Q4V339 395 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CBWD3Q5JTY5 395 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CBWD5Q5RIA9 395 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 SPATA4Q8NEY3 305 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 PIP4K2CQ8TBX8 421 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 NCLNQ969V3 563 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 PPCSQ9HAB8 311 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 PRDM4Q9UKN5 801 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 ITGB1BP2Q9UKP3 347 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
BEST1-203ENST00000524877 C22orf31O95567 290 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 PURAQ00577 322 aaKnown RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 SDHAF4Q5VUM1 108 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 C2orf15Q8WU43 125 aaKnown RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 DHX33Q9H6R0 707 aaKnown RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 LRRC40Q9H9A6 602 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 DDX28Q9NUL7 540 aaKnown RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 COILP38432 576 aaPredicted RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 CDKAL1Q5VV42 579 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 SPACA7Q96KW9 195 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 A0A087X0T9 212 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 FAM228BP0C875 321 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CTSEP14091 401 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 MAPK9P45984 424 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 CAMK2GQ13555 558 aaPredicted RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 ZNF571Q7Z3V5 609 aaPredicted RBP17.51■□□□□ 0.39
BEST1-203ENST00000524877 TEX9Q8N6V9 391 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 TRIM55Q9BYV6 548 aa17.51■□□□□ 0.39
BEST1-203ENST00000524877 ADGRA2Q96PE1 1338 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 CARSP49589 748 aaKnown RBP17.5■□□□□ 0.39
BEST1-203ENST00000524877 CAPRIN1Q14444 709 aaKnown RBP17.5■□□□□ 0.39
BEST1-203ENST00000524877 NFIL3Q16649 462 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 PKN3Q6P5Z2 889 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 XPO1O14980 1071 aaKnown RBP17.5■□□□□ 0.39
BEST1-203ENST00000524877 TRUB2O95900 331 aaKnown RBP17.5■□□□□ 0.39
BEST1-203ENST00000524877 ARMC12Q5T9G4 340 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
BEST1-203ENST00000524877 CCDC33Q8N5R6 958 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 TMEM175Q9BSA9 504 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 TRIM51Q9BSJ1 452 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 CFAP97Q9P2B7 532 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 L3MBTL1Q9Y468 752 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 MAPK8P45983 427 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 NR2C2P49116 596 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 OTUD4Q01804 1114 aaKnown RBP17.5■□□□□ 0.39
BEST1-203ENST00000524877 IL17AQ16552 155 aa17.5■□□□□ 0.39
BEST1-203ENST00000524877 TRMT10CQ7L0Y3 403 aaKnown RBP17.5■□□□□ 0.39
BEST1-203ENST00000524877 NANOGNBQ7Z5D8 188 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms