RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 YWHAGP61981 247 aaKnown RBP eCLIP27.14■■□□□ 1.94
PVT1-219ENST00000523427 PIGZQ86VD9 579 aa27.14■■□□□ 1.94
PVT1-219ENST00000523427 ZNF276Q8N554 614 aa27.14■■□□□ 1.94
PVT1-219ENST00000523427 CYB5D2Q8WUJ1 264 aa27.14■■□□□ 1.94
PVT1-219ENST00000523427 C6orf106Q9H6K1 298 aaPredicted RBP27.14■■□□□ 1.94
PVT1-219ENST00000523427 F13A1P00488 732 aa27.13■■□□□ 1.93
PVT1-219ENST00000523427 ZSCAN22P10073 491 aaPredicted RBP27.13■■□□□ 1.93
PVT1-219ENST00000523427 EIF4HQ15056 248 aaKnown RBP27.13■■□□□ 1.93
PVT1-219ENST00000523427 KIF19Q2TAC6 998 aa27.13■■□□□ 1.93
PVT1-219ENST00000523427 FNDC3BQ53EP0 1204 aaKnown RBP27.13■■□□□ 1.93
PVT1-219ENST00000523427 TMEM174Q8WUU8 243 aa27.13■■□□□ 1.93
PVT1-219ENST00000523427 LHX5Q9H2C1 402 aa27.13■■□□□ 1.93
PVT1-219ENST00000523427 BTBD3Q9Y2F9 522 aa27.13■■□□□ 1.93
PVT1-219ENST00000523427 A0A1B0GVL5 298 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 ZNF883P0CG24 379 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 ACSL1P33121 698 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 E2F5Q15329 346 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 SOWAHCQ53LP3 525 aaPredicted RBP27.12■■□□□ 1.93
PVT1-219ENST00000523427 LAYNQ6UX15 382 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 INTS8Q75QN2 995 aaKnown RBP27.12■■□□□ 1.93
PVT1-219ENST00000523427 FAM186BQ8IYM0 893 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 ARHGAP18Q8N392 663 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 CPXM2Q8N436 756 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 OR2T3Q8NH03 318 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 SNX11Q9Y5W9 270 aa27.12■■□□□ 1.93
PVT1-219ENST00000523427 NUMA1Q14980 2115 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 TKTL1P51854 596 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 DNM1Q05193 864 aaKnown RBP27.11■■□□□ 1.93
PVT1-219ENST00000523427 C1orf216Q8TAB5 229 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 LRIG1Q96JA1 1093 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 CDC6Q99741 560 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 TOR4AQ9NXH8 423 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 KIAA1522Q9P206 1035 aaPredicted RBP27.11■■□□□ 1.93
PVT1-219ENST00000523427 TRAF3IP3Q9Y228 551 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 LAMA5O15230 3695 aa27.11■■□□□ 1.93
PVT1-219ENST00000523427 GOLGA4Q13439 2230 aaKnown RBP27.1■■□□□ 1.93
PVT1-219ENST00000523427 FAM149AA5PLN7 773 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 FLRT2O43155 660 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 TIMM44O43615 452 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 IGLV3-19P01714 112 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 AFF3P51826 1226 aaKnown RBP27.1■■□□□ 1.93
PVT1-219ENST00000523427 SUZ12Q15022 739 aaKnown RBP27.1■■□□□ 1.93
PVT1-219ENST00000523427 MPPE1Q53F39 396 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 TMPRSS7Q7RTY8 843 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 SLC4A11Q8NBS3 891 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 RBBP8NLQ8NC74 664 aaPredicted RBP27.1■■□□□ 1.93
PVT1-219ENST00000523427 TMEM176AQ96HP8 235 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 SLC2A11Q9BYW1 496 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 ULBP1Q9BZM6 244 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 CISHQ9NSE2 258 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 CFAP45Q9UL16 551 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 PLA2G4CQ9UP65 541 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 CABIN1Q9Y6J0 2220 aa27.1■■□□□ 1.93
PVT1-219ENST00000523427 FSBPO95073 299 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 CENPBP07199 599 aaPredicted RBP27.09■■□□□ 1.93
PVT1-219ENST00000523427 HSP90AA1P07900 732 aaKnown RBP27.09■■□□□ 1.93
PVT1-219ENST00000523427 PFKFB1P16118 471 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 CYP4F3Q08477 520 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 TEAD4Q15561 434 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 CHST9Q7L1S5 443 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 FMNL3Q8IVF7 1028 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 BAHD1Q8TBE0 780 aaPredicted RBP27.09■■□□□ 1.93
PVT1-219ENST00000523427 SEMA4DQ92854 862 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 PLD4Q96BZ4 506 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 TMEM8AQ9HCN3 771 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 SFMBT1Q9UHJ3 866 aa27.09■■□□□ 1.93
PVT1-219ENST00000523427 TULP2O00295 520 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 MAPK13O15264 365 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 ZBED1O96006 694 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 HOXD9P28356 352 aaPredicted RBP27.08■■□□□ 1.93
PVT1-219ENST00000523427 HLA-FP30511 346 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 PSMC2P35998 433 aaKnown RBP27.08■■□□□ 1.93
PVT1-219ENST00000523427 HARS2P49590 506 aaKnown RBP27.08■■□□□ 1.93
PVT1-219ENST00000523427 RAD23BP54727 409 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 SLC8A3P57103 927 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 IL9RQ01113 521 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 CAMK2GQ13555 558 aaPredicted RBP27.08■■□□□ 1.93
PVT1-219ENST00000523427 EDEM1Q92611 657 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 EEF2KMTQ96G04 330 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 TM9SF3Q9HD45 589 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 ABCB8Q9NUT2 735 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 ANKRD6Q9Y2G4 727 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.08■■□□□ 1.93
PVT1-219ENST00000523427 PCDHGB2Q9Y5G2 931 aa27.08■■□□□ 1.93
PVT1-219ENST00000523427 URB1O60287 2271 aaKnown RBP27.07■■□□□ 1.92
PVT1-219ENST00000523427 TRABD2BA6NFA1 517 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 SEMA4FO95754 770 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 PRR29P0C7W0 189 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 ADAM9Q13443 819 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 PKP1Q13835 747 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 RNF139Q8WU17 664 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 CCDC47Q96A33 483 aaKnown RBP27.07■■□□□ 1.92
PVT1-219ENST00000523427 TMA16Q96EY4 203 aaKnown RBP27.07■■□□□ 1.92
PVT1-219ENST00000523427 RCOR1Q9UKL0 485 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 IGSF10Q6WRI0 2623 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 PTPRBP23467 1997 aa27.07■■□□□ 1.92
PVT1-219ENST00000523427 CKAP5Q14008 2032 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 RPL13P26373 211 aaKnown RBP27.06■■□□□ 1.92
PVT1-219ENST00000523427 TRIP4Q15650 581 aaPredicted RBP27.06■■□□□ 1.92
PVT1-219ENST00000523427 GOLGA7BQ2TAP0 167 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms