RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 ACOX2Q99424 681 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 MIS12Q9H081 205 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 CACNA2D2Q9NY47 1150 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 CALCOCO1Q9P1Z2 691 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 APEX2Q9UBZ4 518 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 STOML2Q9UJZ1 356 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 CKAP5Q14008 2032 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 CACNA1AO00555 2505 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 IRAK2O43187 625 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 MSI1O43347 362 aaKnown RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 THAP12O43422 761 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 GABBR2O75899 941 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 CALCAP01258 141 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 NCAM1P13591 858 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 GPD2P43304 727 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 RPL34P49207 117 aaKnown RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 TBX4P57082 545 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 RPL6Q02878 288 aaKnown RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 NNTQ13423 1086 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 GEN1Q17RS7 908 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 STPG1Q5TH74 334 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 RNF43Q68DV7 783 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 CLEC4CQ8WTT0 213 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 ZNF606Q8WXB4 792 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 AZIN2Q96A70 460 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 PIWIL1Q96J94 861 aaKnown RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 SERPINB11Q96P15 392 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 DDX50Q9BQ39 737 aaKnown RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 CRACR2AQ9BSW2 395 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 TSPY26PQ9H489 355 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 SMOC1Q9H4F8 434 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 THAP9Q9H5L6 903 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 ELOVL2Q9NXB9 296 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 THAP10Q9P2Z0 257 aaPredicted RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 MBD1Q9UIS9 605 aaPredicted RBP11.35□□□□□ -0.59
PVT1-216ENST00000523068 STON1Q9Y6Q2 735 aa11.35□□□□□ -0.59
PVT1-216ENST00000523068 LAMA1P25391 3075 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 TYW5A2RUC4 315 aaKnown RBP11.34□□□□□ -0.59
PVT1-216ENST00000523068 CAPN9O14815 690 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 SYNCRIPO60506 623 aaKnown RBP11.34□□□□□ -0.59
PVT1-216ENST00000523068 TSPAN3O60637 253 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 IGLV3-27P01718 113 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 NDUFV2P19404 249 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 SLC9A1P19634 815 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
PVT1-216ENST00000523068 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
PVT1-216ENST00000523068 HOXD12P35452 270 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 USP8P40818 1118 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 IL12RB1P42701 662 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 ENPP2Q13822 863 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 ARHGAP44Q17R89 818 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 CT47A1Q5JQC4 288 aaPredicted RBP11.34□□□□□ -0.59
PVT1-216ENST00000523068 PPM1JQ5JR12 505 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 MPP7Q5T2T1 576 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 LYSMD4Q5XG99 296 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 TCEAL6Q6IPX3 200 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 SASS6Q6UVJ0 657 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 BEND5Q7L4P6 421 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 RABEPKQ7Z6M1 372 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 SYT12Q8IV01 421 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 SCUBE3Q8IX30 993 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 TMEFF1Q8IYR6 380 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 WFIKKN2Q8TEU8 576 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 PIGKQ92643 395 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 TCEAL3Q969E4 200 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 FAM149B1Q96BN6 582 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 P2RY11Q96G91 374 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 MED15Q96RN5 788 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 NUSAP1Q9BXS6 441 aaKnown RBP11.34□□□□□ -0.59
PVT1-216ENST00000523068 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 CIPCQ9C0C6 399 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 CD248Q9HCU0 757 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 RXFP3Q9NSD7 469 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 TLR6Q9Y2C9 796 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 RAD54BQ9Y620 910 aa11.34□□□□□ -0.59
PVT1-216ENST00000523068 PI4KAP42356 2102 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 LNP1A1A4G5 178 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 WASH3PC4AMC7 463 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 ACSL4O60488 711 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 PON1P27169 355 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 SNX16P57768 344 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 PTK2Q05397 1052 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 LMAN2Q12907 356 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 ZNF234Q14588 700 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 TMEM110Q86TL2 294 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 METTL3Q86U44 580 aaKnown RBP11.33□□□□□ -0.6
PVT1-216ENST00000523068 AHI1Q8N157 1196 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 FRMD1Q8N878 549 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 DQX1Q8TE96 717 aaKnown RBP11.33□□□□□ -0.6
PVT1-216ENST00000523068 SHC3Q92529 594 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 MRGPRX1Q96LB2 322 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms