RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 HARS2P49590 506 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 CPT1AP50416 773 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TBL3Q12788 808 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 SGO1Q5FBB7 561 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 DMAC2Q9NW81 257 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 LZTS1Q9Y250 596 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 M0R3G1 203 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 EDF1O60869 148 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 INSRRP14616 1297 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 SLC1A6P48664 564 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 HTR3CQ8WXA8 447 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 PRPF18Q99633 342 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 PAPOLBQ9NRJ5 636 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TRMT6Q9UJA5 497 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TRIM13O60858 407 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 SNUPNO95149 360 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 ITGAVP06756 1048 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 DDX5P17844 614 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 ATP6V1C1P21283 382 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 KCNA4P22459 653 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 ATP6V1E1P36543 226 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 PTDSS1P48651 473 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TRPC1P48995 793 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TATDN1Q6P1N9 297 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 KYQ8NBH2 561 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TMEM161BQ8NDZ6 487 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 STKLD1Q8NE28 680 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 VPS50Q96JG6 964 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF333Q96JL9 665 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 PRG3Q9Y2Y8 225 aaPredicted RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TOMM70O94826 608 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 MICAL2O94851 1124 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 PEX5P50542 639 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 PLD3Q8IV08 490 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 MFSD14AQ96MC6 490 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 PWWP2AQ96N64 755 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 THUMPD3Q9BV44 507 aaKnown RBP14.17□□□□□ -0.14
SYNPO-205ENST00000522122 APOL5Q9BWW9 433 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 SPATC1LQ9H0A9 340 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 TRPC7Q9HCX4 862 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 IRAK4Q9NWZ3 460 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 A8MUI8 341 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 H3BRB1 525 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ZDHHC17Q8IUH5 632 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF317Q96PQ6 595 aaPredicted RBP14.17□□□□□ -0.14
SYNPO-205ENST00000522122 TUT1Q9H6E5 874 aaKnown RBP14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ARMCX1Q9P291 453 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 C2CD2LO14523 706 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 KDM1AO60341 852 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 CLPTM1O96005 669 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 NR2C2P49116 596 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 OAZ1P54368 228 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 PTP4A2Q12974 167 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 CRY2Q49AN0 593 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ZC3H12BQ5HYM0 836 aaKnown RBP14.17□□□□□ -0.14
SYNPO-205ENST00000522122 IYDQ6PHW0 289 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 TNIP2Q8NFZ5 429 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 LRRC39Q96DD0 335 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 FOPNLQ96NB1 174 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 GPAMQ9HCL2 828 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 SCN3BQ9NY72 215 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 KCNK4Q9NYG8 393 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 UBP1Q9NZI7 540 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 KANSL1LA0AUZ9 987 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 TRDMT1O14717 391 aaKnown RBP14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ETS1P14921 441 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 KDELR1P24390 212 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 TKTL1P51854 596 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 PRKAA1Q13131 559 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 ECHDC2Q86YB7 292 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 NOCTQ9UK39 431 aaKnown RBP14.17□□□□□ -0.14
SYNPO-205ENST00000522122 UBIAD1Q9Y5Z9 338 aa14.17□□□□□ -0.14
SYNPO-205ENST00000522122 C17orf102A2RUQ5 167 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 HNRNPCL2B2RXH8 293 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 ABLIM1O14639 778 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 DAB1O75553 588 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 HMGCRP04035 888 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 AMPD1P23109 780 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CSHL1Q14406 222 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 LY6KQ17RY6 165 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CCDC153Q494R4 210 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 FITM2Q8N6M3 262 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 C2orf81A6NN90 581 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CALCAP01258 141 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 KCNT2Q6UVM3 1135 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 FICDQ9BVA6 458 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CEP41Q9BYV8 373 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 RNF112Q9ULX5 631 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CFAP99D6REC4 459 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 LYPLA2O95372 231 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 MPOP05164 745 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms