RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RAVER1Q8IY67 606 aaKnown RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 SIRT6Q8N6T7 355 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CNBD1Q8NA66 436 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 BPIFB1Q8TDL5 484 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 SMCR8Q8TEV9 937 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 PPP2R3CQ969Q6 453 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 ASB2Q96Q27 587 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 PPP1R9BQ96SB3 815 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 BRIP1Q9BX63 1249 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 B3GNT5Q9BYG0 378 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 USP44Q9H0E7 712 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 ZMAT3Q9HA38 289 aaKnown RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 XPNPEP3Q9NQH7 507 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 C9orf78Q9NZ63 289 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 RNF7Q9UBF6 113 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF70Q9UC06 446 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 DLG5Q8TDM6 1919 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 RREB1Q92766 1687 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CDHR2Q9BYE9 1310 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 POC1B-GALNT4F8VUJ3 575 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 H0YIN7 160 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 M0R3H8 397 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 FRS3O43559 492 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 CHRM5P08912 532 aaPredicted RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 NBPF7P0C2Y1 421 aaPredicted RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 CYP2D6P10635 497 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 DPEP1P16444 411 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 EPHB2P29323 1055 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 RRP1P56182 461 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 SUMO2P61956 95 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 CYP4F2P78329 520 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 NFE2Q16621 373 aaPredicted RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 L1TD1Q5T7N2 865 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 C1QL2Q7Z5L3 287 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 NEK8Q86SG6 692 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 CAND1Q86VP6 1230 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF280BQ86YH2 543 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 C2CD5Q86YS7 1000 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 FTSJ3Q8IY81 847 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 GALNT4Q8N4A0 578 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 TMEM57Q8N5G2 664 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 TERB1Q8NA31 727 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 PNLDC1Q8NA58 520 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 IL31RAQ8NI17 732 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 CYP2W1Q8TAV3 490 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 SPSB4Q96A44 273 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 FYTTD1Q96QD9 318 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 SNX18Q96RF0 628 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 SYT17Q9BSW7 474 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 BHMT2Q9H2M3 363 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 CHMP4BQ9H444 224 aaKnown RBP3.8□□□□□ -1.8
VPS13B-209ENST00000521559 ANLNQ9NQW6 1124 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 AMFRQ9UKV5 643 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 TPCN1Q9ULQ1 816 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 USP22Q9UPT9 525 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 NUP188Q5SRE5 1749 aa3.8□□□□□ -1.8
VPS13B-209ENST00000521559 A0A0G2JLW4 131 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CFAP69A5D8W1 941 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 MBD3L4A6NDZ8 208 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 MBD3L3A6NE82 208 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 TISP43B9A030 160 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CCP110O43303 1012 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 EXOC3O60645 756 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 BBOX1O75936 387 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 USP1O94782 785 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SCGB1D2O95969 90 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CENPBP07199 599 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 UBTFL1P0CB47 393 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 ADORA2AP29274 412 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 EPHA3P29320 983 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CHRNA5P30532 468 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 ALDH1B1P30837 517 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 PTGER1P34995 402 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SSBP2P81877 361 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 MVPQ14764 893 aaKnown RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CRY2Q49AN0 593 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CCDC152Q4G0S7 254 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 C20orf194Q5TEA3 1177 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CCDC181Q5TID7 509 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 MORN5Q5VZ52 161 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 PAPD7Q5XG87 772 aaKnown RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SLC9A4Q6AI14 798 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 NXNQ6DKJ4 435 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SLC18B1Q6NT16 456 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 PPP4R4Q6NUP7 873 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SERPINA13PQ6UXR4 307 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 CATSPERGQ6ZRH7 1159 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 NOL8Q76FK4 1167 aaKnown RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 OVCH2Q7RTZ1 564 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 YTHDF3Q7Z739 585 aaKnown RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 ITPRIPQ8IWB1 547 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SFTPA1Q8IWL2 248 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 KIAA0319LQ8IZA0 1049 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 SCARB1Q8WTV0 552 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 RPL36ALQ969Q0 106 aaKnown RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF622Q969S3 477 aaKnown RBP eCLIP3.79□□□□□ -1.84e-6■■■□□ 18.8
VPS13B-209ENST00000521559 MASTLQ96GX5 879 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 RBM17Q96I25 401 aaKnown RBP3.79□□□□□ -1.8
VPS13B-209ENST00000521559 KAZALD1Q96I82 304 aa3.79□□□□□ -1.8
VPS13B-209ENST00000521559 NT5C1BQ96P26 610 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms