RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 SH3BGRP55822 239 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 HMGN5P82970 282 aaKnown RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SATB1Q01826 763 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ICA1Q05084 483 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 DPTQ07507 201 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 MTA1Q13330 715 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ATP1A4Q13733 1029 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 BECN1Q14457 450 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ACOX1Q15067 660 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ZKSCAN8Q15776 578 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SLC5A9Q2M3M2 681 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SLC4A8Q2Y0W8 1093 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 GALNTL6Q49A17 601 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ALFQ53S48 1182 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CEP78Q5JTW2 689 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 PRAMEF17Q5VTA0 474 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CCDC144NLQ6NUI1 221 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SLC2A7Q6PXP3 512 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 KYAT3Q6YP21 454 aaKnown RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 LDHAL6AQ6ZMR3 332 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 PTCHD4Q6ZW05 846 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 RD3Q7Z3Z2 195 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 RNF144BQ7Z419 303 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ANKRD23Q86SG2 305 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CPXCR1Q8N123 301 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SIRT6Q8N6T7 355 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ENAHQ8N8S7 591 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ANKRD42Q8N9B4 389 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 MNS1Q8NEH6 495 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 FAM71BQ8TC56 605 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 STT3BQ8TCJ2 826 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 IPCEF1Q8WWN9 437 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 IP6K1Q92551 441 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 NPIPB3Q92617 1050 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CCDC47Q96A33 483 aaKnown RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 C3orf49Q96BT1 292 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 EVI5LQ96CN4 794 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 KAZALD1Q96I82 304 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 RITA1Q96K30 269 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 COQ10AQ96MF6 247 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 C5orf34Q96MH7 638 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 GPR78Q96P69 363 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 WDR24Q96S15 920 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 THAP7Q9BT49 309 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 EFHD1Q9BUP0 239 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 DUSP26Q9BV47 211 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ALG8Q9BVK2 526 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 COLEC11Q9BWP8 271 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 BRD8Q9H0E9 1235 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ZNF700Q9H0M5 742 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 OSBPL5Q9H0X9 879 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 VPS16Q9H269 839 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 DHX36Q9H2U1 1008 aaKnown RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 TOR3AQ9H497 397 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CCDC134Q9H6E4 229 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SAGE1Q9NXZ1 904 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 GGA3Q9NZ52 723 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SRP68Q9UHB9 627 aaKnown RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 POLG2Q9UHN1 485 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 FBXO4Q9UKT5 387 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 AMFRQ9UKV5 643 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 GABRQQ9UN88 632 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 B3GNT3Q9Y2A9 372 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 PCDHA10Q9Y5I2 948 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 HEMK1Q9Y5R4 338 aaPredicted RBP2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 IKBKGQ9Y6K9 419 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 RPS6KL1Q9Y6S9 549 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 NESP48681 1621 aa2.12□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 COL15A1P39059 1388 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 A0A1W2PPC1 479 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 TARM1B6A8C7 271 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 PRYO14603 147 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CTIFO43310 598 aaKnown RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 HTATSF1O43719 755 aaKnown RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 KIF5CO60282 957 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ACTL6BO94805 426 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 HEXIM1O94992 359 aaKnown RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 BAG2O95816 211 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 POLBP06746 335 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 TMIGD3P0DMS9 266 aaPredicted RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ST6GAL1P15907 406 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ZNF37AP17032 561 aaPredicted RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 RPL17P18621 184 aaKnown RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 IDUAP35475 653 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 STAT6P42226 847 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 GSTM5P46439 218 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 ZNF131P52739 623 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 CACNA2D1P54289 1103 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 NAP1L1P55209 391 aaKnown RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 TGFB2P61812 414 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 NSUN2Q08J23 767 aaKnown RBP eCLIP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SEMA3BQ13214 749 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 BLMHQ13867 455 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SMC1AQ14683 1233 aaKnown RBP2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 PROSER3Q2NL68 480 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 SUPT20HL1Q3ZLR7 823 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 FAM153CQ494X1 144 aa2.11□□□□□ -2.07
TVP23C-CDRT4-202ENST00000518506 INO80DQ53TQ3 878 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms