RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 SLC2A12Q8TD20 617 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 SLC22A17Q8WUG5 538 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 NPIPB3Q92617 1050 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 RUBCNQ92622 972 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 P2RY11Q96G91 374 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 KAZALD1Q96I82 304 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 CCDC17Q96LX7 622 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 HS6ST2Q96MM7 605 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 SORBS1Q9BX66 1292 aaKnown RBP3.47□□□□□ -1.85
SKP1-203ENST00000517625 ADGRE3Q9BY15 652 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 TMPRSS5Q9H3S3 457 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 ELAC1Q9H777 363 aaKnown RBP3.47□□□□□ -1.85
SKP1-203ENST00000517625 SAP30LQ9HAJ7 183 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 USP29Q9HBJ7 922 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 SEPSECSQ9HD40 501 aaKnown RBP3.47□□□□□ -1.85
SKP1-203ENST00000517625 ERVK-5Q9HDB9 667 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 ABHD10Q9NUJ1 306 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 ASIC5Q9NY37 505 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 LUZP4Q9P127 313 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 SRP68Q9UHB9 627 aaKnown RBP3.47□□□□□ -1.85
SKP1-203ENST00000517625 ZNHIT2Q9UHR6 403 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 DAPP1Q9UN19 280 aa3.47□□□□□ -1.85
SKP1-203ENST00000517625 SCAF8Q9UPN6 1271 aaKnown RBP3.47□□□□□ -1.85
SKP1-203ENST00000517625 SPATA31A5Q5VU36 1347 aa3.46□□□□□ -1.85
SKP1-203ENST00000517625 SPATA31A6Q5VVP1 1343 aa3.46□□□□□ -1.85
SKP1-203ENST00000517625 SPATA31A7Q8IWB4 1347 aa3.46□□□□□ -1.85
SKP1-203ENST00000517625 LINC01548A6NM66 108 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SLC38A8A6NNN8 435 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 H0Y3Z8 333 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 CA12O43570 354 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 EXOC3O60645 756 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 PRAMEF2O60811 474 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SGPL1O95470 568 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 MBPP02686 304 aaPredicted RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 ALDOAP04075 364 aaKnown RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 SERPINA4P29622 427 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SLC8A1P32418 973 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 GALNSP34059 522 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 THBS4P35443 961 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 COPB1P53618 953 aaKnown RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 ACTR2P61160 394 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 RAE1P78406 368 aaKnown RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 SLC10A2Q12908 348 aaPredicted RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 MFSD13AQ14CX5 517 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SMAD1Q15797 465 aaKnown RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 BTBD16Q32M84 506 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SERPINA13PQ6UXR4 307 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 LAS2Q8IYD9 372 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 BOLLQ8N9W6 283 aaKnown RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 SRFBP1Q8NEF9 429 aaKnown RBP3.46□□□□□ -1.86
SKP1-203ENST00000517625 OR1N1Q8NGS0 311 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SCAMP5Q8TAC9 235 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 HASPINQ8TF76 798 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 HMGB4Q8WW32 186 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 ASB12Q8WXK4 309 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 AKAP1Q92667 903 aaKnown RBP eCLIP3.46□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D20Q96BZ9 403 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 TRAPPC9Q96Q05 1148 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SENP7Q9BQF6 1050 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 FAM167BQ9BTA0 163 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 MRIQ9BWK5 157 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SEMA4CQ9C0C4 833 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 VPS16Q9H269 839 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 CCDC134Q9H6E4 229 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 RIOX1Q9H6W3 641 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 MLXIPQ9HAP2 919 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 ASB6Q9NWX5 421 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SH3BP4Q9P0V3 963 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 SERGEFQ9UGK8 458 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 PGAP2Q9UHJ9 254 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 ADAM21Q9UKJ8 722 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 BAG5Q9UL15 447 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 ASAP1Q9ULH1 1129 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 PCDHGB3Q9Y5G1 929 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 COX11Q9Y6N1 276 aa3.46□□□□□ -1.86
SKP1-203ENST00000517625 CYP3A7-CYP3A51PA0A087WV96 503 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 TCRBV5S1A1TA0A578 114 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 HMX3A6NHT5 357 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 SAC3D1A6NKF1 404 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 KIF28PB7ZC32 967 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 TMEM232C9JQI7 657 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 CLIC1O00299 241 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 SEPT4O43236 478 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PPP6R2O75170 966 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 C1QL1O75973 258 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 RNF8O76064 485 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PDE8BO95263 885 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 IGLV2-14P01704 120 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 CYP3A7P24462 503 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 YY1P25490 414 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 NDUFS1P28331 727 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 GRK5P34947 590 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PCP4P48539 62 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 AARSP49588 968 aaKnown RBP eCLIP3.45□□□□□ -1.864e-6■■■■□ 24
SKP1-203ENST00000517625 CLK3P49761 638 aaKnown RBP3.45□□□□□ -1.86
SKP1-203ENST00000517625 HMGA2P52926 109 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 INHBEP58166 350 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 TUBA4AP68366 448 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 RPS6KA2Q15349 733 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PROSER3Q2NL68 480 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms