RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SATL1Q86VE3 508 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SEPT12Q8IYM1 358 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CERS5Q8N5B7 392 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 NAT8LQ8N9F0 302 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RP9Q8TA86 221 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 CNDP1Q96KN2 507 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ZMAT2Q96NC0 199 aaKnown RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 AGAP3Q96P47 875 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 GPATCH2LQ9NWQ4 482 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 RRN3Q9NYV6 651 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 KLHL42Q9P2K6 505 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 FAM198AQ9UFP1 575 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 SLC39A10Q9ULF5 831 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 MYH13Q9UKX3 1938 aa6.85□□□□□ -1.31
CPNE3-203ENST00000517490 ASTN2O75129 1339 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-203ENST00000517490 HEATR9A2RTY3 570 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PABPN1LA6NDY0 278 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CAPN8A6NHC0 703 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 SIN3BO75182 1162 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CHEK2O96017 543 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 TTKP33981 857 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 HK2P52789 917 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 NOMO1Q15155 1222 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ZPBP2Q6X784 338 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 STRA8Q7Z7C7 330 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 LRRC43Q8N309 656 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 FNIP1Q8TF40 1166 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 TMEM176AQ96HP8 235 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PANX3Q96QZ0 392 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 MYH3P11055 1940 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 MARF1Q9Y4F3 1742 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 MAP3K13O43283 966 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CBFA2T3O75081 653 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 C4BPAP04003 597 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 DLDP09622 509 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CYP2C8P10632 490 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CCDC130P13994 396 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CYP2F1P24903 491 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 HIRAP54198 1017 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 FKBP1AP62942 108 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 GOLGA7BQ2TAP0 167 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 SPANXN3Q5MJ09 141 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 NPNTQ6UXI9 565 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ADGRG6Q86SQ4 1221 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 NCAPG2Q86XI2 1143 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PDSS2Q86YH6 399 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CLVS1Q8IUQ0 354 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ATP6V1E2Q96A05 226 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 RNF157Q96PX1 679 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 WDR41Q9HAD4 459 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PLK2Q9NYY3 685 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ADAM28Q9UKQ2 775 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PPM1HQ9ULR3 514 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 STRCQ7RTU9 1775 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 GSTA4O15217 222 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 MTSS1O43312 755 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 LYPLA1O75608 230 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 TRMUO75648 421 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PENKP01210 267 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PSMA4P25789 261 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 CASP2P42575 452 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 PTGER2P43116 358 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ZNF143P52747 638 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 YWHAZP63104 245 aaKnown RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 METTL21CQ5VZV1 264 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 DENND1BQ6P3S1 775 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 HPS6Q86YV9 775 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 DCLK2Q8N568 766 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 ZSWIM2Q8NEG5 633 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 OSBPL11Q9BXB4 747 aa6.84□□□□□ -1.31
CPNE3-203ENST00000517490 TRPM3Q9HCF6 1732 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-203ENST00000517490 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.32
CPNE3-203ENST00000517490 PLA2G6O60733 806 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 AVILO75366 819 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 MMP10P09238 476 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 ZBTB48P10074 688 aaPredicted RBP6.84□□□□□ -1.32
CPNE3-203ENST00000517490 SERPINB10P48595 397 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM132DQ14C87 1099 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 INSCQ1MX18 579 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 TRIM16LQ309B1 348 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 OR52E8Q6IFG1 317 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 LRRC8BQ6P9F7 803 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 SPC25Q9HBM1 224 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 HOXC10Q9NYD6 342 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 BLOC1S6Q9UL45 172 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.32
CPNE3-203ENST00000517490 A0A096LPK6 155 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 HACD1B0YJ81 288 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 H3BNX3 289 aa6.83□□□□□ -1.32
CPNE3-203ENST00000517490 CLASP2O75122 1294 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 DEAF1O75398 565 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 ASS1P00966 412 aaKnown RBP6.83□□□□□ -1.32
CPNE3-203ENST00000517490 HMGCRP04035 888 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms