RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TYW5A2RUC4 315 aaKnown RBP14.23□□□□□ -0.13
TCOF1-215ENST00000515516 C4orf47A7E2U8 309 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 IRAK2O43187 625 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 HOXD12P35452 270 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 GPD2P43304 727 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 MEA1Q16626 185 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 ARHGAP44Q17R89 818 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 EXOC3L4Q17RC7 722 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 TRIM61Q5EBN2 209 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 DENND1BQ6P3S1 775 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 TRIM65Q6PJ69 517 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 RABEPKQ7Z6M1 372 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 CCDC117Q8IWD4 279 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-215ENST00000515516 SCUBE3Q8IX30 993 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 DEFB119Q8N690 84 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 ZNF557Q8N988 423 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-215ENST00000515516 CEP76Q8TAP6 659 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 WFIKKN2Q8TEU8 576 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 CLEC4CQ8WTT0 213 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 STK32AQ8WU08 396 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 P2RY11Q96G91 374 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 MRGPRX1Q96LB2 322 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 SERPINB11Q96P15 392 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 MED15Q96RN5 788 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-215ENST00000515516 PRDM16Q9HAZ2 1276 aa14.23□□□□□ -0.13
TCOF1-215ENST00000515516 EVLQ9UI08 416 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-215ENST00000515516 IGHV1OR15-9A0A0B4J2B8 117 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 LNP1A1A4G5 178 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 PATE3B3GLJ2 98 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ACSL4O60488 711 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 GABBR2O75899 941 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 CFIP05156 583 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ADRB1P08588 477 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ACADMP11310 421 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 HOXD9P28356 352 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ANP32AP39687 249 aaKnown RBP14.22□□□□□ -0.13
TCOF1-215ENST00000515516 IL12RB1P42701 662 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ATXN3P54252 364 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-215ENST00000515516 IRX4P78413 519 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 RING1Q06587 406 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ZNF234Q14588 700 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 FUT11Q495W5 492 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 FNDC3BQ53EP0 1204 aaKnown RBP14.22□□□□□ -0.13
TCOF1-215ENST00000515516 SYCP2LQ5T4T6 812 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 SERPINA13PQ6UXR4 307 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 ZNF606Q8WXB4 792 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 PRCCQ92733 491 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-215ENST00000515516 AZIN2Q96A70 460 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 LSM14BQ9BX40 385 aaKnown RBP14.22□□□□□ -0.13
TCOF1-215ENST00000515516 CLSTN2Q9H4D0 955 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 THAP9Q9H5L6 903 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 APEX2Q9UBZ4 518 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 PILRBQ9UKJ0 227 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 CLEC4EQ9ULY5 219 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 MYH10P35580 1976 aa14.22□□□□□ -0.13
TCOF1-215ENST00000515516 MYO16Q9Y6X6 1858 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 GTPBP10A4D1E9 387 aaKnown RBP14.21□□□□□ -0.13
TCOF1-215ENST00000515516 TBL1XO60907 577 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 ATP5BP06576 529 aaKnown RBP14.21□□□□□ -0.13
TCOF1-215ENST00000515516 EPHX1P07099 455 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SLC9A1P19634 815 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 ITPKAP23677 461 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SNX16P57768 344 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 ZNF33AQ06730 810 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 NNTQ13423 1086 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 DUOXA1Q1HG43 343 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 UAP1L1Q3KQV9 507 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 MPP7Q5T2T1 576 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 GJB7Q6PEY0 223 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 CHST9Q7L1S5 443 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 TMPRSS6Q8IU80 811 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 RGL4Q8IZJ4 473 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 AHI1Q8N157 1196 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SORCS1Q8WY21 1168 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 FOXJ1Q92949 421 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SIPA1Q96FS4 1042 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SLC4A5Q9BY07 1137 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SLC6A17Q9H1V8 727 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 CD248Q9HCU0 757 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 ABCB8Q9NUT2 735 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 STIM2Q9P246 746 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 SLC12A6Q9UHW9 1150 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 GGA2Q9UJY4 613 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 NAALADL1Q9UQQ1 740 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 TLR6Q9Y2C9 796 aa14.21□□□□□ -0.13
TCOF1-215ENST00000515516 CACNA1AO00555 2505 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 DMXL1Q9Y485 3027 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 ATXN2Q99700 1313 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 GOLGA6L7A0A1B0GV03 622 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 TM4SF5O14894 197 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 IGLV3-27P01718 113 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 APOEP02649 317 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 PABPC1P11940 636 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 PRKCSHP14314 528 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 POLR2EP19388 210 aaKnown RBP14.2□□□□□ -0.14
TCOF1-215ENST00000515516 CD6P30203 668 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 HLA-FP30511 346 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 OXTRP30559 389 aa14.2□□□□□ -0.14
TCOF1-215ENST00000515516 MAPK8P45983 427 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms