RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	SERTAD4	Q9NUC0	356 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	VSX1	Q9NZR4	365 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	USP22	Q9UPT9	525 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CNTN6	Q9UQ52	1028 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DERA	Q9Y315	318 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SALL3	Q9BXA9	1300 aa		3.86	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GXYLT2	A0PJZ3	443 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		E7EVH7	732 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	hCG_1984214	I3L0E3	225 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	INO80B-WBP1	J3KQ70	363 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		K7ENM7	598 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MGST3	O14880	152 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SLC16A3	O15427	465 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CBFA2T3	O75081	653 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RBMXL2	O75526	392 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TAF5L	O75529	589 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	C1QL1	O75973	258 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TMEM63A	O94886	807 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	JUP	P14923	745 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZNF37A	P17032	561 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SERPINA4	P29622	427 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	UQCRC1	P31930	480 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TUB	P50607	506 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CCT8	P50990	548 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CLNS1A	P54105	237 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NR1H2	P55055	460 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NAP1L1	P55209	391 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GRM4	Q14833	912 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RPS6KA2	Q15349	733 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DLGAP5	Q15398	846 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PTCHD3	Q3KNS1	767 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CTXN3	Q4LDR2	81 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	AARS2	Q5JTZ9	985 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ARHGAP40	Q5TG30	622 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SPATA1	Q5VX52	437 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KRTAP5-3	Q6L8H2	238 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RGS7BP	Q6MZT1	257 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZNF788	Q6ZQV5	615 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SLC29A4	Q7RTT9	530 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DTX2	Q86UW9	622 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	HEATR4	Q86WZ0	1026 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LRRC71	Q8N4P6	559 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CCDC89	Q8N998	374 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NSUN7	Q8NE18	718 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CEP70	Q8NHQ1	597 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SUN3	Q8TAQ9	357 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	OVCA2	Q8WZ82	227 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GOLGA1	Q92805	767 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	C3orf49	Q96BT1	292 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	BRD8	Q9H0E9	1235 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PREB	Q9HCU5	417 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	BLOC1S4	Q9NUP1	217 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LIN7C	Q9NUP9	197 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ASB6	Q9NWX5	421 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	IRAK4	Q9NWZ3	460 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FLRT1	Q9NZU1	646 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NRBP1	Q9UHY1	535 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TBX20	Q9UMR3	447 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	FRMD4B	Q9Y2L6	1034 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MRPS17	Q9Y2R5	130 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RRP7A	Q9Y3A4	280 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RABGAP1	Q9Y3P9	1069 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RPS6KL1	Q9Y6S9	549 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ADGRA2	Q96PE1	1338 aa		3.85	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LINC01548	A6NM66	108 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LINC00473	A8K010	186 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	QSOX1	O00391	747 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SEPT4	O43236	478 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PPP6R2	O75170	966 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	JTB	O76095	146 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DLD	P09622	509 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	HGF	P14210	728 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RXRA	P19793	462 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DRD4	P21917	467 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CERS1	P27544	350 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	AKT1	P31749	480 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MTHFS	P49914	203 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ACOX1	Q15067	660 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TBCC	Q15814	346 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	EZH2	Q15910	746 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	BTBD16	Q32M84	506 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LRCH2	Q5VUJ6	765 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	DGAT2L7P	Q6IED9	249 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KRBA2	Q6ZNG9	492 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	NEK10	Q6ZWH5	1172 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RASGRP2	Q7LDG7	609 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ABRA	Q8N0Z2	381 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SEMA6D	Q8NFY4	1073 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RP9	Q8TA86	221 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CSGALNACT1	Q8TDX6	532 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	OSCP1	Q8WVF1	389 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SMG7	Q92540	1137 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CENPI	Q92674	756 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	HVCN1	Q96D96	273 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RSPRY1	Q96DX4	576 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	REEP2	Q9BRK0	252 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	VN1R3	Q9BXE9	311 aa		3.84	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	GPR63	Q9BZJ6	419 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms