RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
DDR1-269ENST00000512725 CNDP2Q96KP4 475 aaKnown RBP16.73■□□□□ 0.27
DDR1-269ENST00000512725 ARID3AQ99856 593 aa16.73■□□□□ 0.27
DDR1-269ENST00000512725 ACE2Q9BYF1 805 aaPredicted RBP16.73■□□□□ 0.27
DDR1-269ENST00000512725 AGO1Q9UL18 857 aaKnown RBP16.73■□□□□ 0.27
DDR1-269ENST00000512725 PLA2G4CQ9UP65 541 aa16.73■□□□□ 0.27
DDR1-269ENST00000512725 CKAP5Q14008 2032 aa16.73■□□□□ 0.27
DDR1-269ENST00000512725 MUC22E2RYF6 1773 aaPredicted RBP16.72■□□□□ 0.27
DDR1-269ENST00000512725 SLC12A8A0AV02 714 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 HHLA1C9JL84 531 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 RFPL3O75679 317 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 VNN1O95497 513 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 CD27P26842 260 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 CTSKP43235 329 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 PSEN1P49768 467 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 AP3M2P53677 418 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 TARDBPQ13148 414 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDR1-269ENST00000512725 SGSM1Q2NKQ1 1148 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 TTC31Q49AM3 519 aaPredicted RBP16.72■□□□□ 0.27
DDR1-269ENST00000512725 TMEM215Q68D42 235 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 SCD5Q86SK9 330 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 UNC93AQ86WB7 457 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 ZNF843Q8N446 348 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 CDK5RAP1Q96SZ6 601 aaKnown RBP16.72■□□□□ 0.27
DDR1-269ENST00000512725 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 STRIP2Q9ULQ0 834 aa16.72■□□□□ 0.27
DDR1-269ENST00000512725 UBE4BO95155 1302 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 TIMM44O43615 452 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 C4BPAP04003 597 aaKnown RBP16.71■□□□□ 0.27
DDR1-269ENST00000512725 PIK3CAP42336 1068 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 SNRPFP62306 86 aaKnown RBP16.71■□□□□ 0.27
DDR1-269ENST00000512725 CCDC173Q0VFZ6 552 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 CAMK2GQ13555 558 aaPredicted RBP16.71■□□□□ 0.27
DDR1-269ENST00000512725 HES3Q5TGS1 186 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.27
DDR1-269ENST00000512725 AASDHPPTQ9NRN7 309 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 MARCH2Q9P0N8 246 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 TFIP11Q9UBB9 837 aaKnown RBP16.71■□□□□ 0.27
DDR1-269ENST00000512725 NCKAP1Q9Y2A7 1128 aa16.71■□□□□ 0.27
DDR1-269ENST00000512725 DFNA5O60443 496 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 CD58P19256 250 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 KIF11P52732 1056 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 RPS14P62263 151 aaKnown RBP16.7■□□□□ 0.26
DDR1-269ENST00000512725 CXADRP78310 365 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
DDR1-269ENST00000512725 CHST9Q7L1S5 443 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 GPR155Q7Z3F1 870 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 EID2Q8N6I1 236 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 PARD3BQ8TEW8 1205 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 SKA1Q96BD8 255 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 SLC6A18Q96N87 628 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 TWNKQ96RR1 684 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 NT5C1AQ9BXI3 368 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 SLC2A11Q9BYW1 496 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 SGK2Q9HBY8 427 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 PCDHGA1Q9Y5H4 931 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 KNTC1P50748 2209 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 KALRNO60229 2985 aa16.7■□□□□ 0.26
DDR1-269ENST00000512725 TP53BP1Q12888 1972 aaPredicted RBP16.69■□□□□ 0.26
DDR1-269ENST00000512725 A0A1B0GTQ1 180 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 PDCP20941 246 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 CASP1P29466 404 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 CFHR1Q03591 330 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 SLC39A14Q15043 492 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 STK38Q15208 465 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 MPPE1Q53F39 396 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 ELF4Q99607 663 aaPredicted RBP16.69■□□□□ 0.26
DDR1-269ENST00000512725 BLZF1Q9H2G9 400 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 PRSS16Q9NQE7 514 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 ABCB8Q9NUT2 735 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 KBTBD4Q9NVX7 518 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 CLIC5Q9NZA1 410 aa16.69■□□□□ 0.26
DDR1-269ENST00000512725 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
DDR1-269ENST00000512725 J3QKU1 62 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 RPN1P04843 607 aaKnown RBP16.68■□□□□ 0.26
DDR1-269ENST00000512725 ASPAP45381 313 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 RACK1P63244 317 aaKnown RBP16.68■□□□□ 0.26
DDR1-269ENST00000512725 DLG4P78352 724 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
DDR1-269ENST00000512725 ZNF394Q53GI3 561 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 ZNF776Q68DI1 518 aaPredicted RBP16.68■□□□□ 0.26
DDR1-269ENST00000512725 KIAA0895LQ68EN5 471 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 CPXM2Q8N436 756 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 NAF1Q96HR8 494 aaKnown RBP16.68■□□□□ 0.26
DDR1-269ENST00000512725 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 DNAI2Q9GZS0 605 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 PNPLA8Q9NP80 782 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 MYLKQ15746 1914 aa16.68■□□□□ 0.26
DDR1-269ENST00000512725 PLXNA2O75051 1894 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 TEX51A0A1B0GUA7 166 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 BRINP1O60477 761 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 C1SP09871 688 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 CDK4P11802 303 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 HLA-FP30511 346 aa16.67■□□□□ 0.26
DDR1-269ENST00000512725 HARS2P49590 506 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms